RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 MTUS1Q9ULD2 1270 aa8.71□□□□□ -1.02
VPS29-203ENST00000546588 NEU3Q9UQ49 428 aa8.71□□□□□ -1.02
VPS29-203ENST00000546588 PCDHA11Q9Y5I1 949 aa8.71□□□□□ -1.02
VPS29-203ENST00000546588 TRANK1O15050 2925 aa8.71□□□□□ -1.02
VPS29-203ENST00000546588 CHD9Q3L8U1 2897 aa8.71□□□□□ -1.02
VPS29-203ENST00000546588 CHD7Q9P2D1 2997 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 SHROOM3Q8TF72 1996 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 TCRBV7S2A1N4TA0A589 114 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 I6L893 689 aaPredicted RBP8.7□□□□□ -1.02
VPS29-203ENST00000546588 APOC4-APOC2K7ER74 178 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 GFRA2O00451 464 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 TEX28O15482 410 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 GRAP2O75791 330 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 ZNF189O75820 626 aaPredicted RBP8.7□□□□□ -1.02
VPS29-203ENST00000546588 APOC2P02655 101 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 KRT1P04264 644 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 CSH1P0DML2 217 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 CSH2P0DML3 217 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 RALAP11233 206 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 NCAM1P13591 858 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 TGM2P21980 687 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 HOXA9P31269 272 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 L1CAMP32004 1257 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 OR1D2P34982 312 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 SULT1E1P49888 294 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 ERVK-21P61565 698 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 PITX1P78337 314 aaPredicted RBP8.7□□□□□ -1.02
VPS29-203ENST00000546588 RING1Q06587 406 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 ADCY2Q08462 1091 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 BIRC2Q13490 618 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 ATP13A4Q4VNC1 1196 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 DCAF6Q58WW2 860 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 MANEALQ5VSG8 457 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 C8orf74Q6P047 294 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 SYDE1Q6ZW31 735 aaPredicted RBP8.7□□□□□ -1.02
VPS29-203ENST00000546588 SPATC1Q76KD6 591 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 MAATS1Q7Z4T9 603 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 TAC4Q86UU9 113 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 MAP7D3Q8IWC1 876 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 PLD5Q8N7P1 536 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 C19orf47Q8N9M1 422 aaKnown RBP8.7□□□□□ -1.02
VPS29-203ENST00000546588 KLHL23Q8NBE8 558 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 SCAMP5Q8TAC9 235 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 SLC35B2Q8TB61 432 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 SPPL3Q8TCT6 385 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 HDAC7Q8WUI4 952 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 PSMG2Q969U7 264 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 FAM149B1Q96BN6 582 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 RTP4Q96DX8 246 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 SERPINB11Q96P15 392 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 CDK5RAP1Q96SZ6 601 aaKnown RBP8.7□□□□□ -1.02
VPS29-203ENST00000546588 PNKPQ96T60 521 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 GDF15Q99988 308 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 DCLK3Q9C098 648 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 RETREG1Q9H6L5 497 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 NMUR1Q9HB89 426 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 PCDH18Q9HCL0 1135 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 NGRNQ9NPE2 291 aaKnown RBP8.7□□□□□ -1.02
VPS29-203ENST00000546588 TLR8Q9NR97 1041 aaKnown RBP8.7□□□□□ -1.02
VPS29-203ENST00000546588 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.7□□□□□ -1.02
VPS29-203ENST00000546588 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.7□□□□□ -1.02
VPS29-203ENST00000546588 OSER1Q9NX31 292 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 AP4E1Q9UPM8 1137 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 NAALADL1Q9UQQ1 740 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 DRG1Q9Y295 367 aaKnown RBP8.7□□□□□ -1.02
VPS29-203ENST00000546588 YIPF1Q9Y548 306 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 ASB3Q9Y575 518 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 CLUHO75153 1309 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 LAMA2P24043 3122 aaKnown RBP8.7□□□□□ -1.02
VPS29-203ENST00000546588 KIAA1549LQ6ZVL6 1849 aa8.7□□□□□ -1.02
VPS29-203ENST00000546588 FAM170AA1A519 330 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 LCHNA4D1U4 455 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 SLC38A8A6NNN8 435 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 KCNU1A8MYU2 1149 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 M0QYT0 321 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 RAD51CO43502 376 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 HYAL3O43820 417 aaPredicted RBP8.69□□□□□ -1.02
VPS29-203ENST00000546588 SEC24AO95486 1093 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 ITGAVP06756 1048 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 CD48P09326 243 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 YWHAQP27348 245 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 ECHS1P30084 290 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 GBP1P32455 592 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 BMP8BP34820 402 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 ADRA1BP35368 520 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 COILP38432 576 aaPredicted RBP8.69□□□□□ -1.02
VPS29-203ENST00000546588 NR2C2P49116 596 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 EPHA5P54756 1037 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 DUSP4Q13115 394 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 PLD1Q13393 1074 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 XRCC4Q13426 336 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 SQSTM1Q13501 440 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 CAMK1Q14012 370 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 DPYSQ14117 519 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 TFDP2Q14188 446 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 BRD3Q15059 726 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 NOMO1Q15155 1222 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 C5orf22Q49AR2 442 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 TEX35Q5T0J7 233 aa8.69□□□□□ -1.02
VPS29-203ENST00000546588 C1QTNF12Q5T7M4 302 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms