RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 RP1L1Q8IWN7 2480 aaPredicted RBP7.09□□□□□ -1.27
LDHA-223ENST00000545215 PRR19A6NJB7 356 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 PIK3R2O00459 728 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 YKT6O15498 198 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 SIGLEC6O43699 453 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 NFATC1O95644 943 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 ITGA2BP08514 1039 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 JMJD7P0C870 316 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 ITIH2P19823 946 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 OXTRP30559 389 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 EIF2DP41214 584 aaKnown RBP7.09□□□□□ -1.27
LDHA-223ENST00000545215 ECI1P42126 302 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 ME1P48163 572 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 NPEPPSP55786 919 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 LTBQ06643 244 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 STAT4Q14765 748 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 ZNF77Q15935 545 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 CTXN3Q4LDR2 81 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 LACTB2Q53H82 288 aaPredicted RBP7.09□□□□□ -1.27
LDHA-223ENST00000545215 MANEAQ5SRI9 462 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 SFMBT2Q5VUG0 894 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 RNF219Q5W0B1 726 aaPredicted RBP7.09□□□□□ -1.27
LDHA-223ENST00000545215 KRT79Q5XKE5 535 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 ADALQ6DHV7 355 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 FAM173BQ6P4H8 233 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 ANO5Q75V66 913 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 ITIH5Q86UX2 942 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 GLIS1Q8NBF1 620 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 CPT1CQ8TCG5 803 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 PSPC1Q8WXF1 523 aaKnown RBP7.09□□□□□ -1.27
LDHA-223ENST00000545215 ATXN7L3BQ96GX2 97 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 CCDC34Q96HJ3 373 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 COX4I2Q96KJ9 171 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 CEP170P1Q96L14 293 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 C8orf48Q96LL4 319 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 C5orf34Q96MH7 638 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 ORAI3Q9BRQ5 295 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 YIPF2Q9BWQ6 316 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 SLC12A9Q9BXP2 914 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 TRIM6Q9C030 488 aaPredicted RBP7.09□□□□□ -1.27
LDHA-223ENST00000545215 PCED1AQ9H1Q7 454 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 TMEM60Q9H2L4 133 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 PRDM8Q9NQV8 689 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 SEPT10Q9P0V9 454 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 LRWD1Q9UFC0 647 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 VAV3Q9UKW4 847 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 SLC5A6Q9Y289 635 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 TRAF6Q9Y4K3 522 aa7.09□□□□□ -1.27
LDHA-223ENST00000545215 A0A1W2PQ27 194 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 A0A1W2PQ64 194 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 VWA3AA6NCI4 1184 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 KCNJ18B7U540 433 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 SYN3O14994 580 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 TSPAN1O60635 241 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 LYPLA2O95372 231 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 CRTAMO95727 393 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 WNT1P04628 370 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 SRGAP2CP0DJJ0 459 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 XRCC6P12956 609 aaKnown RBP eCLIP7.08□□□□□ -1.28
LDHA-223ENST00000545215 CMA1P23946 247 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 DDX6P26196 483 aaKnown RBP eCLIP7.08□□□□□ -1.286e-9■□□□□ 8.2
LDHA-223ENST00000545215 RPA1P27694 616 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 SLC5A2P31639 672 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 CSTF2P33240 577 aaKnown RBP eCLIP7.08□□□□□ -1.28
LDHA-223ENST00000545215 PTGER4P35408 488 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 FLT3P36888 993 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 UBA7P41226 1012 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 WASP42768 502 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 CLCNKBP51801 687 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 CEBPZQ03701 1054 aaKnown RBP7.08□□□□□ -1.28
LDHA-223ENST00000545215 MCL1Q07820 350 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 DUSP4Q13115 394 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 CDK5R2Q13319 367 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 EMC2Q15006 297 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 UPP1Q16831 310 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 CDCA2Q69YH5 1023 aaPredicted RBP7.08□□□□□ -1.28
LDHA-223ENST00000545215 NCAPH2Q6IBW4 605 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 VASH2Q86V25 355 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 TP53INP2Q8IXH6 220 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 EXOC8Q8IYI6 725 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 TOP6BLQ8N6T0 577 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 TEX19Q8NA77 164 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 TMEM143Q96AN5 459 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 HDAC11Q96DB2 347 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 CALML4Q96GE6 196 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 CPB2Q96IY4 423 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 Q96M66 194 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 GCNAQ96QF7 691 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 LXNQ9BS40 222 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 MCMBPQ9BTE3 642 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 CCSER1Q9C0I3 900 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 CUEDC2Q9H467 287 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 DHX33Q9H6R0 707 aaKnown RBP7.08□□□□□ -1.28
LDHA-223ENST00000545215 TUFT1Q9NNX1 390 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 C1GALT1Q9NS00 363 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 RGL1Q9NZL6 768 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 CCDC39Q9UFE4 941 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 USP25Q9UHP3 1055 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 FBXO2Q9UK22 296 aaPredicted RBP7.08□□□□□ -1.28
LDHA-223ENST00000545215 MKL2Q9ULH7 1088 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms