RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 VPS51Q9UID3 782 aa17.36■□□□□ 0.37
HOXD8-204ENST00000544999 FZD4Q9ULV1 537 aa17.36■□□□□ 0.37
HOXD8-204ENST00000544999 HS3ST2Q9Y278 367 aa17.36■□□□□ 0.37
HOXD8-204ENST00000544999 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.36■□□□□ 0.37
HOXD8-204ENST00000544999 A0A0D9SEW6 157 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 ANKRD62A6NC57 917 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 ALOX15BO15296 676 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 SNAP91O60641 907 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 OPHN1O60890 802 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 SRCP12931 536 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 CSRP1P21291 193 aaKnown RBP17.35■□□□□ 0.37
HOXD8-204ENST00000544999 PRKCIP41743 596 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 ZNF143P52747 638 aaPredicted RBP17.35■□□□□ 0.37
HOXD8-204ENST00000544999 FANCCQ00597 558 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 FIGNQ5HY92 759 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 PPP1R15BQ5SWA1 713 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 MANEALQ5VSG8 457 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 DSG4Q86SJ6 1040 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 HDDC3Q8N4P3 179 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 MINDY1Q8N5J2 469 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 C1orf216Q8TAB5 229 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 MCEEQ96PE7 176 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 NEUROG2Q9H2A3 272 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 OSGEPQ9NPF4 335 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 TAS2R14Q9NYV8 317 aa17.35■□□□□ 0.37
HOXD8-204ENST00000544999 UPK3BL1B0FP48 263 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 UPK3BL2E5RIL1 263 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 CCP110O43303 1012 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 RNASEH2AO75792 299 aaKnown RBP17.34■□□□□ 0.37
HOXD8-204ENST00000544999 FSBPO95073 299 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 IL1BP01584 269 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 GOT1P17174 413 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 RRM1P23921 792 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 NOVA1P51513 510 aaKnown RBP17.34■□□□□ 0.37
HOXD8-204ENST00000544999 CLCN6P51797 869 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 GALCP54803 685 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 SCAPQ12770 1279 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 GRIK2Q13002 908 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 CACNA1EQ15878 2313 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 FAM46CQ5VWP2 391 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 KIAA0895LQ68EN5 471 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 PSAPL1Q6NUJ1 521 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 ASCC3Q8N3C0 2202 aaKnown RBP17.34■□□□□ 0.37
HOXD8-204ENST00000544999 AADATQ8N5Z0 425 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 CCDC185Q8N715 623 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 OR7D4Q8NG98 312 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 OR2T34Q8NGX1 318 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 BIRC7Q96CA5 298 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 HAUS4Q9H6D7 363 aa17.34■□□□□ 0.37
HOXD8-204ENST00000544999 DNAAF2Q9NVR5 837 aaKnown RBP17.34■□□□□ 0.37
HOXD8-204ENST00000544999 LRRC72A6NJI9 287 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 C1QTNF3-AMACRE9PGA6 284 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 GOLGA6L19H0YKK7 550 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 MCF2LO15068 1137 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 MT-CO1P00395 513 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 PLEKP08567 350 aaPredicted RBP17.33■□□□□ 0.36
HOXD8-204ENST00000544999 CEACAM1P13688 526 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 RHOQP17081 205 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 DESP17661 470 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 CD27P26842 260 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 MAPKAPK2P49137 400 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 RPL7AP62424 266 aaKnown RBP17.33■□□□□ 0.36
HOXD8-204ENST00000544999 GNA12Q03113 381 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 SEMA3BQ13214 749 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 N4BP2L1Q5TBK1 243 aaPredicted RBP17.33■□□□□ 0.36
HOXD8-204ENST00000544999 E4F1Q66K89 784 aaPredicted RBP17.33■□□□□ 0.36
HOXD8-204ENST00000544999 DCUN1D2Q6PH85 259 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 NCEH1Q6PIU2 408 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 Q6ZVU0 165 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 ZNF571Q7Z3V5 609 aaPredicted RBP17.33■□□□□ 0.36
HOXD8-204ENST00000544999 SLFN11Q7Z7L1 901 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 NLRP14Q86W24 1093 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 ATP11CQ8NB49 1132 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 TBC1D31Q96DN5 1066 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 CCDC114Q96M63 670 aa17.33■□□□□ 0.36
HOXD8-204ENST00000544999 FARP1Q9Y4F1 1045 aaPredicted RBP17.33■□□□□ 0.36
HOXD8-204ENST00000544999 CHD5Q8TDI0 1954 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 FAM47DPA6NHR8 397 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 TMCO5BA8MYB1 307 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 C10orf142B7Z368 130 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 SLC7A4O43246 635 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 GJB3O75712 270 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 LRIG2O94898 1065 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 IGHV4-34P06331 123 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 GZMAP12544 262 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 GLDCP23378 1020 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 DRD3P35462 400 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 ETFBP38117 255 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 PBX1P40424 430 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 ADPRHP54922 357 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 AIF1P55008 147 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 UBASH3AP57075 661 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 KLHL30Q0D2K2 578 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 SKOR2Q2VWA4 1001 aaPredicted RBP17.32■□□□□ 0.36
HOXD8-204ENST00000544999 ZSCAN23Q3MJ62 389 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 RETSATQ6NUM9 610 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 RWDD4Q6NW29 188 aaKnown RBP17.32■□□□□ 0.36
HOXD8-204ENST00000544999 IL27RAQ6UWB1 636 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 DRC7Q8IY82 874 aa17.32■□□□□ 0.36
HOXD8-204ENST00000544999 OR2I1PQ8NGU4 316 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms