RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PLK5Q496M5 336 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 FNDC3BQ53EP0 1204 aaKnown RBP7.6□□□□□ -1.19
CPSF7-224ENST00000544990 FIGNQ5HY92 759 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 TMEM215Q68D42 235 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 RNF43Q68DV7 783 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 FBXL22Q6P050 247 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 LRRC31Q6UY01 552 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 IRF2BP2Q7Z5L9 587 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 KBTBD6Q86V97 674 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 PHF13Q86YI8 300 aaPredicted RBP7.6□□□□□ -1.19
CPSF7-224ENST00000544990 KIAA2013Q8IYS2 634 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 CFAP52Q8N1V2 620 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 VWA5B2Q8N398 1253 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 DCLK2Q8N568 766 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 OLIG1Q8TAK6 271 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 NT5C3BQ969T7 300 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 IQCDQ96DY2 449 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 C1orf74Q96LT6 269 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 CFAP57Q96MR6 1250 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 PRICKLE1Q96MT3 831 aaPredicted RBP7.6□□□□□ -1.19
CPSF7-224ENST00000544990 RPRD1AQ96P16 312 aaPredicted RBP7.6□□□□□ -1.19
CPSF7-224ENST00000544990 PCDHB18PQ96TA0 734 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 TBCBQ99426 244 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 PRMT1Q99873 361 aaKnown RBP7.6□□□□□ -1.19
CPSF7-224ENST00000544990 TKTL2Q9H0I9 626 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 SIK2Q9H0K1 926 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 PIGVQ9NUD9 493 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 ARHGEF38Q9NXL2 777 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 AIPL1Q9NZN9 384 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 SUN2Q9UH99 717 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 XPO7Q9UIA9 1087 aaKnown RBP7.6□□□□□ -1.19
CPSF7-224ENST00000544990 TMEM59LQ9UK28 342 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 USP18Q9UMW8 372 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 INVSQ9Y283 1065 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 PCDHGA5Q9Y5G8 931 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 RAD54BQ9Y620 910 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 CEP192Q8TEP8 1941 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 PLXND1Q9Y4D7 1925 aa7.6□□□□□ -1.19
CPSF7-224ENST00000544990 ZFHX2Q9C0A1 2572 aaPredicted RBP7.59□□□□□ -1.19
CPSF7-224ENST00000544990 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.59□□□□□ -1.19
CPSF7-224ENST00000544990 SIGLEC16A6NMB1 481 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 DCLK1O15075 740 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 CLDN11O75508 207 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 ENDOD1O94919 500 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 EPN2O95208 641 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 ADCY5O95622 1261 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 EPHX1P07099 455 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 THBS1P07996 1170 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 ACADMP11310 421 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 EDN3P14138 238 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 CD33P20138 364 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 SDHBP21912 280 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 RDXP35241 583 aaKnown RBP7.59□□□□□ -1.19
CPSF7-224ENST00000544990 P2RY2P41231 377 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 CDH4P55283 916 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 ATP11AP98196 1134 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 SULT2A1Q06520 285 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 KLHL30Q0D2K2 578 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 ZNF177Q13360 481 aaPredicted RBP7.59□□□□□ -1.19
CPSF7-224ENST00000544990 AUHQ13825 339 aaKnown RBP7.59□□□□□ -1.19
CPSF7-224ENST00000544990 FUT11Q495W5 492 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.59□□□□□ -1.19
CPSF7-224ENST00000544990 SPDYCQ5MJ68 293 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 RNF219Q5W0B1 726 aaPredicted RBP7.59□□□□□ -1.19
CPSF7-224ENST00000544990 ACAD10Q6JQN1 1059 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 KIAA1211LQ6NV74 962 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 LRSAM1Q6UWE0 723 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 KIAA1324Q6UXG2 1013 aaKnown RBP7.59□□□□□ -1.19
CPSF7-224ENST00000544990 SLC36A4Q6YBV0 504 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 LPCAT2Q7L5N7 544 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 PHLDB2Q86SQ0 1253 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 ADIPOR2Q86V24 386 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 ABCA7Q8IZY2 2146 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 CCAR2Q8N163 923 aaKnown RBP7.59□□□□□ -1.19
CPSF7-224ENST00000544990 EMC1Q8N766 993 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 C3orf20Q8ND61 904 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 WFDC5Q8TCV5 224 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 CYB5D2Q8WUJ1 264 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 RXFP2Q8WXD0 754 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 RLN3Q8WXF3 142 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 SORCS1Q8WY21 1168 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 PRCCQ92733 491 aaPredicted RBP7.59□□□□□ -1.19
CPSF7-224ENST00000544990 TTC17Q96AE7 1141 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 VCPIP1Q96JH7 1222 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 HAPLN3Q96S86 360 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 DUSP15Q9H1R2 295 aaPredicted RBP7.59□□□□□ -1.19
CPSF7-224ENST00000544990 ARRDC1-AS1Q9H2J1 176 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 TSPY26PQ9H489 355 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 HAUS4Q9H6D7 363 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 FBRSQ9HAH7 460 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 PRDM16Q9HAZ2 1276 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 NDFIP2Q9NV92 336 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 CALCOCO1Q9P1Z2 691 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 VANGL2Q9ULK5 521 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 HS3ST4Q9Y661 456 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 BZW2Q9Y6E2 419 aaKnown RBP7.59□□□□□ -1.19
CPSF7-224ENST00000544990 RIF1Q5UIP0 2472 aaKnown RBP7.59□□□□□ -1.19
CPSF7-224ENST00000544990 CKAP5Q14008 2032 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 NUP205Q92621 2012 aa7.59□□□□□ -1.19
CPSF7-224ENST00000544990 SDK1Q7Z5N4 2213 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms