RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 GLIS1Q8NBF1 620 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 PPP1R13LQ8WUF5 828 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 EME1Q96AY2 570 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 SERPINB11Q96P15 392 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 CDH19Q9H159 772 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 CHST12Q9NRB3 414 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 AAASQ9NRG9 546 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 GIMAP4Q9NUV9 329 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 CNTN6Q9UQ52 1028 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 PTCH2Q9Y6C5 1203 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 SLX4Q8IY92 1834 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 C2orf71A6NGG8 1288 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 F5H5T6 163 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 H7C4K7 107 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 PAPSS1O43252 624 aaPredicted RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 GRIN3BO60391 1043 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 SMPD1P17405 629 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 HOXD10P28358 340 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 TUBP50607 506 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 ARHGEF6Q15052 776 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 ARHGAP17Q68EM7 881 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 MRNIPQ6NTE8 343 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 GALNT4Q8N4A0 578 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 POU5F2Q8N7G0 328 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 FBXO32Q969P5 355 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 TRAPPC9Q96Q05 1148 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 MUC3BQ9H195 1237 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 CDHR5Q9HBB8 845 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 GPAMQ9HCL2 828 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 SCUBE2Q9NQ36 999 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 ENTPD7Q9NQZ7 604 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 DIABLOQ9NR28 239 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 RBM22Q9NW64 420 aaKnown RBP eCLIP5.89□□□□□ -1.47
VPS50-220ENST00000544910 CD274Q9NZQ7 290 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 RBPJLQ9UBG7 517 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 IGKV6D-21A0A0A0MT36 114 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 HNRNPRO43390 633 aaKnown RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 PYGLP06737 847 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 IRF1P10914 325 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 COX4I1P13073 169 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 ANPEPP15144 967 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 BDNFP23560 247 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 HARS2P49590 506 aaKnown RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 ARHGAP1Q07960 439 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 PRKD1Q15139 912 aaPredicted RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 PRAMEF19Q5SWL8 479 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 RIPOR1Q6ZS17 1223 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 FAM35AQ86V20 835 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 PCDH19Q8TAB3 1148 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 BLOC1S5Q8TDH9 187 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 TRIM63Q969Q1 353 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 PPP2R3CQ969Q6 453 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 NCLNQ969V3 563 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 ZNF184Q99676 751 aaPredicted RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 PRDM12Q9H4Q4 367 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 CYP4F12Q9HCS2 524 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 TSR3Q9UJK0 312 aaKnown RBP5.89□□□□□ -1.47
VPS50-220ENST00000544910 RNF112Q9ULX5 631 aa5.89□□□□□ -1.47
VPS50-220ENST00000544910 SMIM28A0A1B0GU29 152 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 GOLGA8TH3BQL2 631 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 GSC2O15499 205 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 ATP6V1C1P21283 382 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 L1CAMP32004 1257 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 GLUD2P49448 558 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 CACNA2D1P54289 1103 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 KCNK10P57789 538 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 GBE1Q04446 702 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 EFEMP1Q12805 493 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 DPYSL2Q16555 572 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 INSCQ1MX18 579 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 ULK2Q8IYT8 1036 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 CMASQ8NFW8 434 aaPredicted RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 SNRNP27Q8WVK2 155 aaKnown RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 DACH2Q96NX9 599 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 TWNKQ96RR1 684 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 EGFL8Q99944 293 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 PNPLA8Q9NP80 782 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 TUBA8Q9NY65 449 aaPredicted RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 COPG1Q9Y678 874 aaKnown RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 GLP2RO95838 553 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 SCNN1GP51170 649 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 TBX4P57082 545 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 PTAR1Q7Z6K3 402 aaPredicted RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 ZNF513Q8N8E2 541 aaPredicted RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 USP13Q92995 863 aaPredicted RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 UNKQ9C0B0 810 aaKnown RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 GBA3Q9H227 469 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 ADAM7Q9H2U9 754 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 MINDY3Q9H8M7 445 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 OLA1Q9NTK5 396 aaKnown RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 NDFIP2Q9NV92 336 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 ADAMTS5Q9UNA0 930 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 VPS9D1Q9Y2B5 631 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.88□□□□□ -1.47
VPS50-220ENST00000544910 ZNF839A8K0R7 811 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 E2F6O75461 281 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 USP1O94782 785 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 VAPBO95292 243 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 NEK3P51956 506 aa5.88□□□□□ -1.47
VPS50-220ENST00000544910 WNT7BP56706 349 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms