RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 PRDM16Q9HAZ2 1276 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 KCND1Q9NSA2 647 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ERVW-1Q9UQF0 538 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 JRKLQ9Y4A0 524 aa14.82□□□□□ -0.04
TNFRSF1A-216ENST00000543995 MUC3AQ02505 3323 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 NYNRINQ9P2P1 1898 aaKnown RBP14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 KCNK3O14649 394 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ENC1O14682 589 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 MFSD11O43934 449 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 CST8O60676 142 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ATG13O75143 517 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 KLF8O95600 359 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SRPRAP08240 638 aaKnown RBP14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 MAGEA9P43362 315 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 RPS9P46781 194 aaKnown RBP14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ZNF234Q14588 700 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 PAFAH1B3Q15102 231 aaKnown RBP14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 TAZQ16635 292 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SEL1L2Q5TEA6 688 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 CCDC181Q5TID7 509 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 DCAF12L1Q5VU92 463 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SLC9A4Q6AI14 798 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 RETSATQ6NUM9 610 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 AADACL2Q6P093 401 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SERPINA13PQ6UXR4 307 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 BMP8AQ7Z5Y6 402 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ARHGAP12Q8IWW6 846 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 FBXL6Q8N531 539 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 TXNDC5Q8NBS9 432 aaKnown RBP14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ACOX2Q99424 681 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 HEMGNQ9BXL5 484 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ACE2Q9BYF1 805 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 OSBPL8Q9BZF1 889 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 CHRDQ9H2X0 955 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SP110Q9HB58 689 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 THAP10Q9P2Z0 257 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 VPS51Q9UID3 782 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ZKSCAN5Q9Y2L8 839 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 HEY1Q9Y5J3 304 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 TRIOO75962 3097 aa14.81□□□□□ -0.04
TNFRSF1A-216ENST00000543995 DLL1O00548 723 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 NPC1O15118 1278 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 KDELR3O43731 214 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 MAP3K6O95382 1288 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 HNRNPLP14866 589 aaKnown RBP eCLIP14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 NTSR1P30989 418 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 WASP42768 502 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 STK19P49842 368 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ARF5P84085 180 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SERINC3Q13530 473 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 PTPRNQ16849 979 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 AFMIDQ63HM1 303 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 LINGO4Q6UY18 593 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 TP53INP2Q8IXH6 220 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 PLD5Q8N7P1 536 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 IL17RCQ8NAC3 791 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ATP11CQ8NB49 1132 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 TLR10Q9BXR5 811 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 CACNA2D2Q9NY47 1150 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 HCN2Q9UL51 889 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SLC8A2Q9UPR5 921 aa14.8□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SHROOM3Q8TF72 1996 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ZSCAN5CA6NGD5 496 aaPredicted RBP14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 WASH3PC4AMC7 463 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 TJP3O95049 919 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 PTPN7P35236 360 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 IL12RB1P42701 662 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 GEMIN4P57678 1058 aaKnown RBP14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 GBE1Q04446 702 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ACCSLQ4AC99 568 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 HSF5Q4G112 596 aaPredicted RBP14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 TMEM31Q5JXX7 168 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 EOGTQ5NDL2 527 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 PKN3Q6P5Z2 889 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 NPNTQ6UXI9 565 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 LEKR1Q6ZMV7 388 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ATPAF2Q8N5M1 289 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 P3H4Q92791 437 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 HAUS1Q96CS2 278 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 C1QTNF1Q9BXJ1 281 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 EFR3BQ9Y2G0 817 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 STON1Q9Y6Q2 735 aa14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 MUC22E2RYF6 1773 aaPredicted RBP14.79□□□□□ -0.04
TNFRSF1A-216ENST00000543995 PRR33A8MZF0 331 aa14.78□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ZMPSTE24O75844 475 aa14.78□□□□□ -0.04
TNFRSF1A-216ENST00000543995 EPHX1P07099 455 aa14.78□□□□□ -0.04
TNFRSF1A-216ENST00000543995 HOXB2P14652 356 aa14.78□□□□□ -0.04
TNFRSF1A-216ENST00000543995 TGM2P21980 687 aa14.78□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ADCY2Q08462 1091 aa14.78□□□□□ -0.04
TNFRSF1A-216ENST00000543995 MTAPQ13126 283 aa14.78□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ARHGAP36Q6ZRI8 547 aa14.78□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SPEM1Q8N4L4 309 aa14.78□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ZNF366Q8N895 744 aa14.78□□□□□ -0.04
TNFRSF1A-216ENST00000543995 TMEM105Q8N8V8 129 aa14.78□□□□□ -0.04
TNFRSF1A-216ENST00000543995 ERLEC1Q96DZ1 483 aa14.78□□□□□ -0.04
TNFRSF1A-216ENST00000543995 MRGPRX3Q96LB0 322 aa14.78□□□□□ -0.04
TNFRSF1A-216ENST00000543995 IER2Q9BTL4 223 aa14.78□□□□□ -0.04
TNFRSF1A-216ENST00000543995 CARD9Q9H257 536 aa14.78□□□□□ -0.04
TNFRSF1A-216ENST00000543995 C11orf16Q9NQ32 467 aa14.78□□□□□ -0.04
TNFRSF1A-216ENST00000543995 SPATA6Q9NWH7 488 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms