RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 ZNF18P17022 549 aa18.79■□□□□ 0.6
RAP1B-229ENST00000543393 PLK1P53350 603 aa18.79■□□□□ 0.6
RAP1B-229ENST00000543393 SRSF1Q07955 248 aaKnown RBP eCLIP18.79■□□□□ 0.6
RAP1B-229ENST00000543393 NFATC3Q12968 1075 aa18.79■□□□□ 0.6
RAP1B-229ENST00000543393 ZNF542PQ5EBM4 170 aa18.79■□□□□ 0.6
RAP1B-229ENST00000543393 PIP5KL1Q5T9C9 394 aa18.79■□□□□ 0.6
RAP1B-229ENST00000543393 Q6ZVU0 165 aa18.79■□□□□ 0.6
RAP1B-229ENST00000543393 TAC4Q86UU9 113 aa18.79■□□□□ 0.6
RAP1B-229ENST00000543393 CIR1Q86X95 450 aaPredicted RBP18.79■□□□□ 0.6
RAP1B-229ENST00000543393 SLC22A18ASQ8N1D0 253 aa18.79■□□□□ 0.6
RAP1B-229ENST00000543393 CCDC47Q96A33 483 aaKnown RBP18.79■□□□□ 0.6
RAP1B-229ENST00000543393 PRR11Q96HE9 360 aaPredicted RBP18.79■□□□□ 0.6
RAP1B-229ENST00000543393 HSFY1Q96LI6 401 aa18.79■□□□□ 0.6
RAP1B-229ENST00000543393 ZSWIM1Q9BR11 485 aa18.79■□□□□ 0.6
RAP1B-229ENST00000543393 IL17BQ9UHF5 180 aa18.79■□□□□ 0.6
RAP1B-229ENST00000543393 COQ4Q9Y3A0 265 aa18.79■□□□□ 0.6
RAP1B-229ENST00000543393 PCDHGA8Q9Y5G5 932 aa18.79■□□□□ 0.6
RAP1B-229ENST00000543393 ENTPD2Q9Y5L3 495 aa18.79■□□□□ 0.6
RAP1B-229ENST00000543393 PTPN13Q12923 2485 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 A0A1B0GVL5 298 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 CDRT15L2A8MXV6 281 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 ALOX15BO15296 676 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 ATP9BO43861 1147 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 PAEPP09466 180 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 EPB41P11171 864 aaKnown RBP18.78■□□□□ 0.6
RAP1B-229ENST00000543393 PFKFB1P16118 471 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 HNRNPA2B1P22626 353 aaKnown RBP18.78■□□□□ 0.6
RAP1B-229ENST00000543393 AKT2P31751 481 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 VASPP50552 380 aaPredicted RBP18.78■□□□□ 0.6
RAP1B-229ENST00000543393 CLDN2P57739 230 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 LRMPQ12912 555 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 DLG2Q15700 870 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 ZNF284Q2VY69 593 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 EDRF1Q3B7T1 1238 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 ZC3H12AQ5D1E8 599 aaKnown RBP18.78■□□□□ 0.6
RAP1B-229ENST00000543393 DCAF17Q5H9S7 520 aaPredicted RBP18.78■□□□□ 0.6
RAP1B-229ENST00000543393 TCERG1LQ5VWI1 586 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 SYPL2Q5VXT5 272 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 NEK5Q6P3R8 708 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 TMEM270Q6UE05 265 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 GCNT7Q6ZNI0 430 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 ERCC4Q92889 916 aaPredicted RBP18.78■□□□□ 0.6
RAP1B-229ENST00000543393 FAM149B1Q96BN6 582 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 GRAMD1AQ96CP6 724 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 IFT43Q96FT9 208 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 BTN2A3PQ96KV6 586 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 FAM117AQ9C073 453 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 DNAJC28Q9NX36 388 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 USP25Q9UHP3 1055 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 SLC25A13Q9UJS0 675 aa18.78■□□□□ 0.6
RAP1B-229ENST00000543393 HEMK1Q9Y5R4 338 aaPredicted RBP18.78■□□□□ 0.6
RAP1B-229ENST00000543393 PMS2P1A4D2B8 440 aa18.77■□□□□ 0.6
RAP1B-229ENST00000543393 F5H5T6 163 aa18.77■□□□□ 0.6
RAP1B-229ENST00000543393 BNIP3LO60238 219 aa18.77■□□□□ 0.6
RAP1B-229ENST00000543393 CENPBP07199 599 aaPredicted RBP18.77■□□□□ 0.6
RAP1B-229ENST00000543393 HNRNPKP61978 463 aaKnown RBP eCLIP18.77■□□□□ 0.61e-8■■■■■ 29.6
RAP1B-229ENST00000543393 CNGA2Q16280 664 aa18.77■□□□□ 0.6
RAP1B-229ENST00000543393 CDKN3Q16667 212 aa18.77■□□□□ 0.6
RAP1B-229ENST00000543393 ZSCAN23Q3MJ62 389 aa18.77■□□□□ 0.6
RAP1B-229ENST00000543393 CXorf57Q6NSI4 855 aaKnown RBP18.77■□□□□ 0.6
RAP1B-229ENST00000543393 HORMAD1Q86X24 394 aa18.77■□□□□ 0.6
RAP1B-229ENST00000543393 EXD3Q8N9H8 876 aa18.77■□□□□ 0.6
RAP1B-229ENST00000543393 ALG14Q96F25 216 aa18.77■□□□□ 0.6
RAP1B-229ENST00000543393 RP1P56715 2156 aa18.76■□□□□ 0.59
RAP1B-229ENST00000543393 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.76■□□□□ 0.59
RAP1B-229ENST00000543393 CPED1A4D0V7 1026 aa18.76■□□□□ 0.59
RAP1B-229ENST00000543393 CALCAP01258 141 aa18.76■□□□□ 0.59
RAP1B-229ENST00000543393 CTSLP07711 333 aa18.76■□□□□ 0.59
RAP1B-229ENST00000543393 TBXAS1P24557 533 aaPredicted RBP18.76■□□□□ 0.59
RAP1B-229ENST00000543393 BRD2P25440 801 aaKnown RBP18.76■□□□□ 0.59
RAP1B-229ENST00000543393 CLN3Q13286 438 aa18.76■□□□□ 0.59
RAP1B-229ENST00000543393 ZNF177Q13360 481 aaPredicted RBP18.76■□□□□ 0.59
RAP1B-229ENST00000543393 ARL13BQ3SXY8 428 aa18.76■□□□□ 0.59
RAP1B-229ENST00000543393 ZCCHC8Q6NZY4 707 aaKnown RBP18.76■□□□□ 0.59
RAP1B-229ENST00000543393 GUSBP11Q6P575 273 aa18.76■□□□□ 0.59
RAP1B-229ENST00000543393 FOXR1Q6PIV2 292 aa18.76■□□□□ 0.59
RAP1B-229ENST00000543393 Q6ZSR6 202 aa18.76■□□□□ 0.59
RAP1B-229ENST00000543393 ABI3BPQ7Z7G0 1075 aa18.76■□□□□ 0.59
RAP1B-229ENST00000543393 ARRDC3Q96B67 414 aa18.76■□□□□ 0.59
RAP1B-229ENST00000543393 PRMT1Q99873 361 aaKnown RBP18.76■□□□□ 0.59
RAP1B-229ENST00000543393 TRPM6Q9BX84 2022 aa18.75■□□□□ 0.59
RAP1B-229ENST00000543393 TCAF2A6NFQ2 919 aa18.75■□□□□ 0.59
RAP1B-229ENST00000543393 RNF225M0QZC1 329 aaPredicted RBP18.75■□□□□ 0.59
RAP1B-229ENST00000543393 CETN3O15182 167 aa18.75■□□□□ 0.59
RAP1B-229ENST00000543393 F13A1P00488 732 aa18.75■□□□□ 0.59
RAP1B-229ENST00000543393 OXCT1P55809 520 aa18.75■□□□□ 0.59
RAP1B-229ENST00000543393 DPYDQ12882 1025 aa18.75■□□□□ 0.59
RAP1B-229ENST00000543393 OR6B2Q6IFH4 312 aa18.75■□□□□ 0.59
RAP1B-229ENST00000543393 RBM44Q6ZP01 1051 aaKnown RBP18.75■□□□□ 0.59
RAP1B-229ENST00000543393 EFL1Q7Z2Z2 1120 aaKnown RBP18.75■□□□□ 0.59
RAP1B-229ENST00000543393 CLEC14AQ86T13 490 aa18.75■□□□□ 0.59
RAP1B-229ENST00000543393 LURAP1LQ8IV03 231 aa18.75■□□□□ 0.59
RAP1B-229ENST00000543393 ARL14Q8N4G2 192 aa18.75■□□□□ 0.59
RAP1B-229ENST00000543393 ZNF548Q8NEK5 533 aaPredicted RBP18.75■□□□□ 0.59
RAP1B-229ENST00000543393 OR52K2Q8NGK3 314 aa18.75■□□□□ 0.59
RAP1B-229ENST00000543393 CCNL2Q96S94 520 aaPredicted RBP18.75■□□□□ 0.59
RAP1B-229ENST00000543393 FEM1AQ9BSK4 669 aa18.75■□□□□ 0.59
RAP1B-229ENST00000543393 ST7Q9NRC1 585 aa18.75■□□□□ 0.59
RAP1B-229ENST00000543393 RCOR1Q9UKL0 485 aa18.75■□□□□ 0.59
RAP1B-229ENST00000543393 CFAP45Q9UL16 551 aa18.75■□□□□ 0.59
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