RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 PRDM16Q9HAZ2 1276 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 SLCO3A1Q9UIG8 710 aa18.82■□□□□ 0.6
COPS7A-216ENST00000543170 SMG5Q9UPR3 1016 aaKnown RBP18.82■□□□□ 0.6
COPS7A-216ENST00000543170 GOLGA6L3A6NEY3 463 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 BTNL10A8MVZ5 291 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 TTC34A8MYJ7 566 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 SNAP91O60641 907 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 KRT7P08729 469 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 GOT1P17174 413 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 SLC1A1P43005 524 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 NDST2P52849 883 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 GEMIN4P57678 1058 aaKnown RBP18.81■□□□□ 0.6
COPS7A-216ENST00000543170 ARF5P84085 180 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 ZBTB16Q05516 673 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 SRSF5Q13243 272 aaKnown RBP18.81■□□□□ 0.6
COPS7A-216ENST00000543170 SIM2Q14190 667 aaPredicted RBP18.81■□□□□ 0.6
COPS7A-216ENST00000543170 ELAVL3Q14576 367 aaKnown RBP18.81■□□□□ 0.6
COPS7A-216ENST00000543170 MESDQ14696 234 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 POLD3Q15054 466 aaPredicted RBP18.81■□□□□ 0.6
COPS7A-216ENST00000543170 MAP7D1Q3KQU3 841 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 C9orf64Q5T6V5 341 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 TMPRSS6Q8IU80 811 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 HSPH1Q92598 858 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 PRCCQ92733 491 aaPredicted RBP18.81■□□□□ 0.6
COPS7A-216ENST00000543170 PTPRN2Q92932 1015 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 ZC3H10Q96K80 434 aaKnown RBP18.81■□□□□ 0.6
COPS7A-216ENST00000543170 RSPH9Q9H1X1 276 aaPredicted RBP18.81■□□□□ 0.6
COPS7A-216ENST00000543170 NOL6Q9H6R4 1146 aaKnown RBP18.81■□□□□ 0.6
COPS7A-216ENST00000543170 PCDH18Q9HCL0 1135 aa18.81■□□□□ 0.6
COPS7A-216ENST00000543170 CWC15Q9P013 229 aaKnown RBP18.81■□□□□ 0.6
COPS7A-216ENST00000543170 USP36Q9P275 1121 aaKnown RBP18.81■□□□□ 0.6
COPS7A-216ENST00000543170 PRR23AA6NEV1 266 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 ZSCAN5CA6NGD5 496 aaPredicted RBP18.8■□□□□ 0.6
COPS7A-216ENST00000543170 CBX4O00257 560 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 SIN3BO75182 1162 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 IGLV3-19P01714 112 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 SRCP12931 536 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 ERCC2P18074 760 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 ACVRL1P37023 503 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 SERPINH1P50454 418 aaKnown RBP18.8■□□□□ 0.6
COPS7A-216ENST00000543170 ZNF776Q68DI1 518 aaPredicted RBP18.8■□□□□ 0.6
COPS7A-216ENST00000543170 IL31Q6EBC2 164 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 KIAA1324Q6UXG2 1013 aaKnown RBP18.8■□□□□ 0.6
COPS7A-216ENST00000543170 CEP68Q76N32 757 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 TSC1Q92574 1164 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 SIPA1Q96FS4 1042 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 CSPG4P5Q96PW8 444 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 SPON2Q9BUD6 331 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 CEP44Q9C0F1 390 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 LRRC19Q9H756 370 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 RAB23Q9ULC3 237 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 HPCAL4Q9UM19 191 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 SCML1Q9UN30 329 aa18.8■□□□□ 0.6
COPS7A-216ENST00000543170 REXO2Q9Y3B8 237 aaKnown RBP18.8■□□□□ 0.6
COPS7A-216ENST00000543170 USP34Q70CQ2 3546 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 ALOX15BO15296 676 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 DAPK3O43293 454 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 GLDCP23378 1020 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 SSR1P43307 286 aaKnown RBP18.79■□□□□ 0.6
COPS7A-216ENST00000543170 NUMBP49757 651 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 ARSEP51690 589 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 VAV2P52735 878 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 TAS2R40P59535 323 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 PDK2Q15119 407 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 LRRC38Q5VT99 294 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 AFMIDQ63HM1 303 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 LAIR1Q6GTX8 287 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 CPNE8Q86YQ8 564 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 TXLNBQ8N3L3 684 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 LZTR1Q8N653 840 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 ATP11CQ8NB49 1132 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 CCDC112Q8NEF3 446 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 ZNF670Q9BS34 389 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 KLC2Q9H0B6 622 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 SLC6A17Q9H1V8 727 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 OTOGLQ3ZCN5 2332 aa18.79■□□□□ 0.6
COPS7A-216ENST00000543170 NUP205Q92621 2012 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 IGHV1OR15-9A0A0B4J2B8 117 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 TMEM110-MUSTN1A8MSY1 372 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 RASA4BC9J798 803 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 DCLK1O15075 740 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 PJA2O43164 708 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 RASA4O43374 803 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 KDELR3O43731 214 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 RNASEH1O60930 286 aaKnown RBP18.78■□□□□ 0.6
COPS7A-216ENST00000543170 MT-CO1P00395 513 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 CDH6P55285 790 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 SERINC3Q13530 473 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 KRT81Q14533 505 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 DLG2Q15700 870 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 PLK5Q496M5 336 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 C11orf63Q6NUN7 778 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 C22orf39Q6P5X5 142 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 SLC36A4Q6YBV0 504 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 PRR23BQ6ZRT6 265 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 VSIG1Q86XK7 387 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 ACRBPQ8NEB7 543 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 CASKIN2Q8WXE0 1202 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 ERLEC1Q96DZ1 483 aa18.78■□□□□ 0.6
COPS7A-216ENST00000543170 HMCESQ96FZ2 354 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms