RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 AJAP1Q9UKB5 411 aaPredicted RBP7.94□□□□□ -1.14
LRP6-206ENST00000543091 EIF3HO15372 352 aaKnown RBP eCLIP7.93□□□□□ -1.143e-6■■■□□ 18.4
LRP6-206ENST00000543091 GPC4O75487 556 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 RFPL2O75678 378 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 PABPC1P11940 636 aaKnown RBP7.93□□□□□ -1.14
LRP6-206ENST00000543091 ARL4DP49703 201 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 PTP4A2Q12974 167 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 MBTPS1Q14703 1052 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 XKR4Q5GH76 650 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 SPPL3Q8TCT6 385 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 ULK4Q96C45 1275 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 C9orf72Q96LT7 481 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 TBL1YQ9BQ87 522 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 CEP41Q9BYV8 373 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 VPS45Q9NRW7 570 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 SENP1Q9P0U3 644 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 MCM3APO60318 1980 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 LEFTY2O00292 366 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 GMNNO75496 209 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 CHRM3P20309 590 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 RING1Q06587 406 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 MMRN1Q13201 1228 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 ZSCAN26Q16670 478 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 SYPL2Q5VXT5 272 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 OLFML1Q6UWY5 402 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 SPDYE1Q8NFV5 336 aaPredicted RBP7.93□□□□□ -1.14
LRP6-206ENST00000543091 HES6Q96HZ4 224 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 PLCD4Q9BRC7 762 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 SYNDIG1Q9H7V2 258 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 VIPAS39Q9H9C1 493 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 INTS9Q9NV88 658 aaKnown RBP7.93□□□□□ -1.14
LRP6-206ENST00000543091 GDE1Q9NZC3 331 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 EVPLQ92817 2033 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 TULP2O00295 520 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 ZW10O43264 779 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 SMIM24O75264 130 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 GLP2RO95838 553 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 TMPRSS15P98073 1019 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 USP10Q14694 798 aaKnown RBP7.93□□□□□ -1.14
LRP6-206ENST00000543091 PUS10Q3MIT2 529 aaKnown RBP7.93□□□□□ -1.14
LRP6-206ENST00000543091 SETMARQ53H47 684 aaPredicted RBP7.93□□□□□ -1.14
LRP6-206ENST00000543091 ANKRD20A2Q5SQ80 823 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 ANKRD20A1Q5TYW2 823 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 ANKRD20A3Q5VUR7 823 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 FAM171BQ6P995 826 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 C3orf62Q6ZUJ4 267 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 GLT6D1Q7Z4J2 308 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 CMTM8Q8IZV2 173 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 PDCD7Q8N8D1 485 aaKnown RBP7.93□□□□□ -1.14
LRP6-206ENST00000543091 NIPA2Q8N8Q9 360 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 HNRNPLLQ8WVV9 542 aaKnown RBP7.93□□□□□ -1.14
LRP6-206ENST00000543091 KCTD15Q96SI1 283 aaPredicted RBP7.93□□□□□ -1.14
LRP6-206ENST00000543091 PLAAQ9Y263 795 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 HCFC2Q9Y5Z7 792 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 ZNF840PA6NDX5 716 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 H3BNC9 293 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 VPS26AO75436 327 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 RHOBTB1O94844 696 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 SERPINH1P50454 418 aaKnown RBP7.93□□□□□ -1.14
LRP6-206ENST00000543091 ELP6Q0PNE2 266 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 SETD3Q86TU7 594 aaPredicted RBP7.93□□□□□ -1.14
LRP6-206ENST00000543091 HLA-CQ95604 372 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 SPACA7Q96KW9 195 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 RILPQ96NA2 401 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 CDH7Q9ULB5 785 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 FZD10Q9ULW2 581 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 CNTN6Q9UQ52 1028 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 ERVW-1Q9UQF0 538 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 WNT6Q9Y6F9 365 aa7.93□□□□□ -1.14
LRP6-206ENST00000543091 GOLGA8QA0A0J9YX86 632 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 GOLGA8OA6NCC3 632 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 GOLGA8NF8WBI6 632 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 MAN2B1O00754 1011 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 ABLIM1O14639 778 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 KCNA4P22459 653 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 CD86P42081 329 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 AFF1P51825 1210 aaKnown RBP7.92□□□□□ -1.14
LRP6-206ENST00000543091 MLLT6P55198 1093 aaPredicted RBP7.92□□□□□ -1.14
LRP6-206ENST00000543091 AP1S1P61966 158 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 MPP3Q13368 585 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 HIC1Q14526 733 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 CCDC38Q502W7 563 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 TCEAL5Q5H9L2 206 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 CCDC185Q8N715 623 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 C3orf58Q8NDZ4 430 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 ELMO2Q96JJ3 720 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 CLSTN3Q9BQT9 956 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 ZBP1Q9H171 429 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 CNOT10Q9H9A5 744 aaKnown RBP7.92□□□□□ -1.14
LRP6-206ENST00000543091 CACYBPQ9HB71 228 aaKnown RBP7.92□□□□□ -1.14
LRP6-206ENST00000543091 ZDHHC4Q9NPG8 344 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 TRMT6Q9UJA5 497 aaKnown RBP7.92□□□□□ -1.14
LRP6-206ENST00000543091 ILVBLA1L0T0 632 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 C2orf71A6NGG8 1288 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 MEI4A8MW99 385 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 FSCN2O14926 492 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 POP4O95707 220 aaKnown RBP7.92□□□□□ -1.14
LRP6-206ENST00000543091 LATS1O95835 1130 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 MSH3P20585 1137 aa7.92□□□□□ -1.14
LRP6-206ENST00000543091 GABRB2P47870 512 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms