RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 CXorf51AA0A1B0GTR3 108 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 A0A1W2PQF6 199 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 C3orf70A6NLC5 250 aaPredicted RBP17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 K7ESF4 209 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 CBX4O00257 560 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 CTNNA2P26232 953 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 CTNNA1P35221 906 aaKnown RBP17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 NNMTP40261 264 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 STK19P49842 368 aaPredicted RBP17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 ANGPT1Q15389 498 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 ODF2Q5BJF6 829 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 AFMIDQ63HM1 303 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 TMCO3Q6UWJ1 677 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 NT5DC3Q86UY8 548 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 KATNAL2Q8IYT4 538 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 CAMKK1Q8N5S9 505 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 NPWQ8N729 165 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 PCDH19Q8TAB3 1148 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 KRT35Q92764 455 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 CD248Q9HCU0 757 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 POLMQ9NP87 494 aaPredicted RBP17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 LZTFL1Q9NQ48 299 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 SLCO3A1Q9UIG8 710 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 HPCAL4Q9UM19 191 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 HS3ST2Q9Y278 367 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 PCDHA3Q9Y5H8 950 aa17.5■□□□□ 0.39
RABGGTA-203ENST00000543002 CCDC66A2RUB6 948 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 KDELR3O43731 214 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 EPHX1P07099 455 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 TDGF1P13385 188 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 HLA-EP13747 358 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 COL9A1P20849 921 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 GLDCP23378 1020 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 HOXA6P31267 233 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 MARCKSL1P49006 195 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 ARF5P84085 180 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 CSTF1Q05048 431 aaKnown RBP17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 SLC20A2Q08357 652 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 SERINC3Q13530 473 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 STARD3Q14849 445 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 RETSATQ6NUM9 610 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 PEX26Q7Z412 305 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 ARHGAP12Q8IWW6 846 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 TSTD1Q8NFU3 115 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 RNF25Q96BH1 459 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 HMCESQ96FZ2 354 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 CELF6Q96J87 481 aaKnown RBP17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 RNF157Q96PX1 679 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 HHIPQ96QV1 700 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 SLC39A8Q9C0K1 460 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 SUN2Q9UH99 717 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 AMFRQ9UKV5 643 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 MFHAS1Q9Y4C4 1052 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 RAD54BQ9Y620 910 aa17.49■□□□□ 0.39
RABGGTA-203ENST00000543002 ARHGAP42A6NI28 874 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 TTC34A8MYJ7 566 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 ATP9BO43861 1147 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 SYNCRIPO60506 623 aaKnown RBP17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 ZRANB2O95218 330 aaKnown RBP eCLIP17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 APBB3O95704 486 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 MT-CO1P00395 513 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 SERPINB6P35237 376 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 CAMK2GQ13555 558 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 PAFAH1B3Q15102 231 aaKnown RBP17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 HNRNPA1L2Q32P51 320 aaKnown RBP17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 KIAA1211LQ6NV74 962 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 TSSK4Q6SA08 328 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 LINGO4Q6UY18 593 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 ZNF354CQ86Y25 554 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 RCOR2Q8IZ40 523 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 SH2D3CQ8N5H7 860 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 PQLC3Q8N755 202 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 ZNF366Q8N895 744 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 EXD1Q8NHP7 514 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 UBE2Q2Q8WVN8 375 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 KCNH6Q9H252 994 aa17.48■□□□□ 0.39
RABGGTA-203ENST00000543002 TCRBV21S2A2A0A5A6 115 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 ZSCAN5CA6NGD5 496 aaPredicted RBP17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 MIF4GDA9UHW6 222 aaKnown RBP17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 FTCDO95954 541 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 SP9P0CG40 484 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 SRCP12931 536 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 PEX5P50542 639 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 PAPOLAP51003 745 aaKnown RBP17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 CLCN6P51797 869 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 GEMIN4P57678 1058 aaKnown RBP17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 TAZQ16635 292 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 ZNF528Q3MIS6 628 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 NCBP2-AS2Q69YL0 99 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 MFSD7Q6UXD7 560 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 ATP11CQ8NB49 1132 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 PRSS33Q8NF86 280 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 FRS2Q8WU20 508 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 RBM41Q96IZ5 413 aaKnown RBP17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 MAK16Q9BXY0 300 aaKnown RBP17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 PRDM16Q9HAZ2 1276 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 PRSS16Q9NQE7 514 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 NUP205Q92621 2012 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 EDDM13A0A1B0GTR0 161 aa17.47■□□□□ 0.39
RABGGTA-203ENST00000543002 TARSL2A2RTX5 802 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms