RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 TBC1D3FA6NER0 549 aaPredicted RBP2.61□□□□□ -1.99
KNTC1-213ENST00000542727 AGAP5A6NIR3 686 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 SMTNL1A8MU46 457 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 TBC1D3LB9A6J9 549 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 INAFM1C9JVW0 142 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 VWA5AO00534 786 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 KRT38O76015 456 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 ACTL6BO94805 426 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 ALDOAP04075 364 aaKnown RBP2.61□□□□□ -1.99
KNTC1-213ENST00000542727 LCATP04180 440 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 TBC1D3HP0C7X1 549 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 IGFBP2P18065 325 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 SERPINF1P36955 418 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 STAT1P42224 750 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 SLC37A1P57057 533 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 HILS1P60008 231 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 ERVFC1-1P60608 527 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 SHC2P98077 582 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 PMPCAQ10713 525 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 KIF5AQ12840 1032 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 SF3A3Q12874 501 aaKnown RBP eCLIP2.61□□□□□ -1.99
KNTC1-213ENST00000542727 GPS2Q13227 327 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 GALNT3Q14435 633 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 AAK1Q2M2I8 961 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 TUBB8Q3ZCM7 444 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 PRAMEF19Q5SWL8 479 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 DCAF12L2Q5VW00 463 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 C9orf57Q5W0N0 161 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 TBC1D3GQ6DHY5 549 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 TBC1D3CQ6IPX1 549 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 ERAP2Q6P179 960 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 SYNE3Q6ZMZ3 975 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 SLC16A12Q6ZSM3 486 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 CREB3L2Q70SY1 520 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 CTU1Q7Z7A3 348 aaKnown RBP2.61□□□□□ -1.99
KNTC1-213ENST00000542727 TRABD2AQ86V40 505 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 IGFN1Q86VF2 1251 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 TBC1D3Q8IZP1 549 aaPredicted RBP2.61□□□□□ -1.99
KNTC1-213ENST00000542727 ENAHQ8N8S7 591 aaPredicted RBP2.61□□□□□ -1.99
KNTC1-213ENST00000542727 SCAMP5Q8TAC9 235 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 NPIPB3Q92617 1050 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 C3orf49Q96BT1 292 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 DUX5Q96PT3 197 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 RMDN3Q96TC7 470 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 PAGR1Q9BTK6 254 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.61□□□□□ -1.99
KNTC1-213ENST00000542727 TP63Q9H3D4 680 aaPredicted RBP2.61□□□□□ -1.99
KNTC1-213ENST00000542727 ELAC1Q9H777 363 aaKnown RBP2.61□□□□□ -1.99
KNTC1-213ENST00000542727 PTPRHQ9HD43 1115 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 PNRC2Q9NPJ4 139 aaKnown RBP2.61□□□□□ -1.99
KNTC1-213ENST00000542727 GRHPRQ9UBQ7 328 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 PCDHA10Q9Y5I2 948 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 PTGDR2Q9Y5Y4 395 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 SLC4A4Q9Y6R1 1079 aa2.61□□□□□ -1.99
KNTC1-213ENST00000542727 LMTK3Q96Q04 1460 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 SCN5AQ14524 2016 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 A0A087WYN8 130 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 LOC105369274A0A096LPK9 316 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 LOC102723532A0A0G2JNH3 316 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 HMX3A6NHT5 357 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 SAC3D1A6NKF1 404 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 BECN2A8MW95 431 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 SYT5O00445 386 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 ACKR2O00590 384 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 DHHO43323 396 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 MSI1O43347 362 aaKnown RBP2.6□□□□□ -1.99
KNTC1-213ENST00000542727 GRID2O43424 1007 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 NBNO60934 754 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 KRT36O76013 467 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 NEURL1O76050 574 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 PLGP00747 810 aaPredicted RBP2.6□□□□□ -1.99
KNTC1-213ENST00000542727 ITGA2BP08514 1039 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 CHRNA5P30532 468 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 SLC16A2P36021 539 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 FAM3BP58499 235 aaPredicted RBP2.6□□□□□ -1.99
KNTC1-213ENST00000542727 KRTAP10-5P60370 271 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 RPL15P61313 204 aaKnown RBP2.6□□□□□ -1.99
KNTC1-213ENST00000542727 AP2B1P63010 937 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 TLE3Q04726 772 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 PDCD2Q16342 344 aaPredicted RBP2.6□□□□□ -1.99
KNTC1-213ENST00000542727 HLFQ16534 295 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 FNBP1LQ5T0N5 605 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 WBP2NLQ6ICG8 309 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 FBXL22Q6P050 247 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 PRSS57Q6UWY2 283 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 C16orf82Q7Z2V1 217 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 GPSM1Q86YR5 675 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 SLC44A2Q8IWA5 706 aaPredicted RBP2.6□□□□□ -1.99
KNTC1-213ENST00000542727 ADGRF3Q8IZF5 1079 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 OR4N4Q8N0Y3 316 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 SLC25A41Q8N5S1 370 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 CSGALNACT1Q8TDX6 532 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 CLEC4CQ8WTT0 213 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 TMEM255BQ8WV15 326 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 CCT6BQ92526 530 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 RTP4Q96DX8 246 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 TRAPPC9Q96Q05 1148 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 WDR77Q9BQA1 342 aaPredicted RBP2.6□□□□□ -1.99
KNTC1-213ENST00000542727 RTKNQ9BST9 563 aa2.6□□□□□ -1.99
KNTC1-213ENST00000542727 KATNAL1Q9BW62 490 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms