RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 PTPN1P18031 435 aaKnown RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 RPS6KB1P23443 525 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 HLA-FP30511 346 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 HNRNPH3P31942 346 aaKnown RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 RFC4P35249 363 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 TMPOP42166 694 aaKnown RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 RAP1GAPP47736 663 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 HCAR3P49019 387 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 HOXA1P49639 335 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 ENTPD1P49961 510 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 CASP5P51878 434 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 RCAN1P53805 252 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 PEX3P56589 373 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 DCDC1P59894 354 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 ACTR3P61158 418 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 PSMC5P62195 406 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 PHC1P78364 1004 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 GSTO1P78417 241 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 IFITM2Q01629 132 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 RHAGQ02094 409 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 ST3GAL1Q11201 340 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 CSTF3Q12996 717 aaKnown RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 TRPC3Q13507 836 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 PDE1CQ14123 709 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 DHX34Q14147 1143 aaKnown RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 SPARCL1Q14515 664 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 KCNAB1Q14722 419 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 NECTIN1Q15223 517 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 OASLQ15646 514 aaKnown RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 SLC14A2Q15849 920 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 SV2CQ496J9 727 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 VWA3BQ502W6 1294 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 BRDTQ58F21 947 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 ACSBG2Q5FVE4 666 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 BEND3Q5T5X7 828 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 NBPF12Q5TAG4 269 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 AADACL4Q5VUY2 407 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 FAM205BPQ63HN1 556 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 PAOXQ6QHF9 649 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 SEZ6L2Q6UXD5 910 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 ZNF767PQ75MW2 155 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 LPCAT2Q7L5N7 544 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 APTXQ7Z2E3 356 aaKnown RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 TMC3Q7Z5M5 1100 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 GLRX5Q86SX6 157 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 TTC7BQ86TV6 843 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 HORMAD1Q86X24 394 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 LRRC6Q86X45 466 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 TMPRSS6Q8IU80 811 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 ZNF565Q8N9K5 539 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 OR8H1Q8NGG4 311 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 ACTRT1Q8TDG2 376 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 SSH3Q8TE77 659 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 SETD7Q8WTS6 366 aaKnown RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 RNF141Q8WVD5 230 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 CASKIN2Q8WXE0 1202 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 TMEM80Q96HE8 168 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 AHCYL2Q96HN2 611 aaKnown RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 DNAJC1Q96KC8 554 aaKnown RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 EXOC2Q96KP1 924 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 HS6ST2Q96MM7 605 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 ZNF560Q96MR9 790 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 INPP4AQ96PE3 977 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 ZNF347Q96SE7 839 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 PRMT1Q99873 361 aaKnown RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 C17orf62Q9BQA9 187 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 BCL7BQ9BQE9 202 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 WACQ9BTA9 647 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 MLPHQ9BV36 600 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 MXD3Q9BW11 206 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 KIFC1Q9BW19 673 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 BTBD2Q9BX70 525 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 PITPNM3Q9BZ71 974 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 TXLNGYQ9BZA5 131 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 EDEM3Q9BZQ6 932 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 SLC6A17Q9H1V8 727 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 GOLPH3Q9H4A6 298 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 TMEM206Q9H813 350 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 TRIM45Q9H8W5 580 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 PPCSQ9HAB8 311 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 HMG20AQ9NP66 347 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 FBXO28Q9NVF7 368 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 RIC8BQ9NVN3 520 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 SENP1Q9P0U3 644 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 NYAP2Q9P242 653 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 IPO11Q9UI26 975 aaKnown RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 CNOT6Q9ULM6 557 aaKnown RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 MED16Q9Y2X0 877 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 TESMINQ9Y4I5 508 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 PCDHGA3Q9Y5H0 932 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 MROH5Q6ZUA9 1318 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 LMTK3Q96Q04 1460 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 ALS2Q96Q42 1657 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 A0A0U1RQJ8 604 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 LOC100653049A0A140TA62 436 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 ESYT3A0FGR9 886 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 SLC9B1P1A6NJY1 282 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 SMIM23A6NLE4 172 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms