RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 FAM227BQ96M60 508 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 CMTM3Q96MX0 182 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 MAP7D2Q96T17 732 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 FAM118BQ9BPY3 351 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 ZPBPQ9BS86 351 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 SOX7Q9BT81 388 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 FOXP3Q9BZS1 431 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 NYXQ9GZU5 481 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 STN1Q9H668 368 aaKnown RBP5.75□□□□□ -1.49
DDB1-219ENST00000541513 UNKLQ9H9P5 680 aaKnown RBP5.75□□□□□ -1.49
DDB1-219ENST00000541513 TM9SF3Q9HD45 589 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 CD93Q9NPY3 652 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 LANCL2Q9NS86 450 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 ZMAT5Q9UDW3 170 aaKnown RBP5.75□□□□□ -1.49
DDB1-219ENST00000541513 CDH22Q9UJ99 828 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 OSGIN1Q9UJX0 560 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 CPSF3Q9UKF6 684 aaKnown RBP5.75□□□□□ -1.49
DDB1-219ENST00000541513 CFAP45Q9UL16 551 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 SNX14Q9Y5W7 946 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 CAPN6Q9Y6Q1 641 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 CARMIL3Q8ND23 1372 aa5.75□□□□□ -1.49
DDB1-219ENST00000541513 ZNF804BA4D1E1 1349 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 RNF123Q5XPI4 1314 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 RIC1Q4ADV7 1423 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 TCRBV21S2A2A0A5A6 115 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 TMEM82A0PJX8 343 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 CTAGE9A4FU28 777 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 AQP7P3A6NL99 342 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 FAM170BA6NMN3 283 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 J3KTA2 159 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 M0QX08 132 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 SGK1O00141 431 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 RAB27BO00194 218 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 POLRMTO00411 1230 aaKnown RBP5.74□□□□□ -1.49
DDB1-219ENST00000541513 CA12O43570 354 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 GPR32O75388 356 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 WISP1O95388 367 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 LARGE1O95461 756 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 CBX7O95931 251 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 FUCA1P04066 466 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 CD1AP06126 327 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 ABCB1P08183 1280 aaPredicted RBP5.74□□□□□ -1.49
DDB1-219ENST00000541513 MMP10P09238 476 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 ARP10275 920 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 XRCC6P12956 609 aaKnown RBP eCLIP5.74□□□□□ -1.49
DDB1-219ENST00000541513 TPH1P17752 444 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 FUT4P22083 530 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 COG7P83436 770 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 DBPQ10586 325 aaPredicted RBP5.74□□□□□ -1.49
DDB1-219ENST00000541513 NPRL3Q12980 569 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 ALCAMQ13740 583 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 GAS6Q14393 721 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 DGKDQ16760 1214 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 HYAL4Q2M3T9 481 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 MYLK3Q32MK0 819 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 TBRG1Q3YBR2 411 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 RABL6Q3YEC7 729 aaPredicted RBP5.74□□□□□ -1.49
DDB1-219ENST00000541513 PRRT3Q5FWE3 981 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 TBC1D9BQ66K14 1250 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 HMBOX1Q6NT76 420 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 ZDHHC24Q6UX98 284 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 RBPMS2Q6ZRY4 209 aaKnown RBP5.74□□□□□ -1.49
DDB1-219ENST00000541513 FAM214BQ7L5A3 538 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 PI4KAP1Q8N8J0 262 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 IL17RCQ8NAC3 791 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 XXYLT1Q8NBI6 393 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 FBXO15Q8NCQ5 510 aaPredicted RBP5.74□□□□□ -1.49
DDB1-219ENST00000541513 OR7D4Q8NG98 312 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 DNAAF4Q8WXU2 420 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 FCRL2Q96LA5 508 aaPredicted RBP5.74□□□□□ -1.49
DDB1-219ENST00000541513 DGAT2Q96PD7 388 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 PPP1R10Q96QC0 940 aaKnown RBP5.74□□□□□ -1.49
DDB1-219ENST00000541513 NUDT22Q9BRQ3 303 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 SLC25A23Q9BV35 468 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 ACPTQ9BZG2 426 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 API5Q9BZZ5 524 aaKnown RBP5.74□□□□□ -1.49
DDB1-219ENST00000541513 TINAGL1Q9GZM7 467 aaPredicted RBP5.74□□□□□ -1.49
DDB1-219ENST00000541513 PCED1AQ9H1Q7 454 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 RWDD1Q9H446 243 aaPredicted RBP5.74□□□□□ -1.49
DDB1-219ENST00000541513 ZNF552Q9H707 407 aaPredicted RBP5.74□□□□□ -1.49
DDB1-219ENST00000541513 FSCN3Q9NQT6 498 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 ABCB8Q9NUT2 735 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 C6orf203Q9P0P8 240 aaPredicted RBP5.74□□□□□ -1.49
DDB1-219ENST00000541513 COX16Q9P0S2 106 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 SEC63Q9UGP8 760 aaKnown RBP5.74□□□□□ -1.49
DDB1-219ENST00000541513 TRAF3IP3Q9Y228 551 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 MAP3K2Q9Y2U5 619 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 PCDHGA5Q9Y5G8 931 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 PCDHGA1Q9Y5H4 931 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 C10orf71Q711Q0 1435 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 AOX1Q06278 1338 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 UBN2Q6ZU65 1347 aa5.74□□□□□ -1.49
DDB1-219ENST00000541513 CACNA1SQ13698 1873 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 SSU72P8A0A1W2PR75 194 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 FAM90A7PA6NKC0 464 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 OR6C76A6NM76 312 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 C16orf96A6NNT2 1141 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 FAM90A22PA8MWA6 464 aa5.73□□□□□ -1.49
DDB1-219ENST00000541513 FAM90A12PA8MX19 464 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms