RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 TMEM245Q9H330 911 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 LRRC19Q9H756 370 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 POLMQ9NP87 494 aaPredicted RBP15.86■□□□□ 0.13
DDB1-218ENST00000540784 C2orf42Q9NWW7 574 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 VPS51Q9UID3 782 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 KIAA1549LQ6ZVL6 1849 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 CCDC66A2RUB6 948 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 ARHGAP42A6NI28 874 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 C3orf70A6NLC5 250 aaPredicted RBP15.85■□□□□ 0.13
DDB1-218ENST00000540784 ZNF487B1APH4 448 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 DCLK1O15075 740 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 ZMPSTE24O75844 475 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 FTCDO95954 541 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 EPHX1P07099 455 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 GLDCP23378 1020 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 CTNNA2P26232 953 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 CTNNA1P35221 906 aaKnown RBP15.85■□□□□ 0.13
DDB1-218ENST00000540784 STK19P49842 368 aaPredicted RBP15.85■□□□□ 0.13
DDB1-218ENST00000540784 VASPP50552 380 aaPredicted RBP15.85■□□□□ 0.13
DDB1-218ENST00000540784 PAPOLAP51003 745 aaKnown RBP15.85■□□□□ 0.13
DDB1-218ENST00000540784 CSTF1Q05048 431 aaKnown RBP15.85■□□□□ 0.13
DDB1-218ENST00000540784 SERINC3Q13530 473 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 STARD3Q14849 445 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 AFMIDQ63HM1 303 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 TMEM92Q6UXU6 159 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 VSIG1Q86XK7 387 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 CAMKK1Q8N5S9 505 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 UBL4BQ8N7F7 174 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 ATP11CQ8NB49 1132 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 EXD1Q8NHP7 514 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 KRT35Q92764 455 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 HMCESQ96FZ2 354 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 PRRX2Q99811 253 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 KLC2Q9H0B6 622 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 PRDM16Q9HAZ2 1276 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 ETNK2Q9NVF9 386 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 FBXO4Q9UKT5 387 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 RAD54BQ9Y620 910 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 CAPN6Q9Y6Q1 641 aa15.85■□□□□ 0.13
DDB1-218ENST00000540784 TTC34A8MYJ7 566 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 MIF4GDA9UHW6 222 aaKnown RBP15.84■□□□□ 0.13
DDB1-218ENST00000540784 DFFAO00273 331 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 ALDH1A2O94788 518 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 PAPSS2O95340 614 aaPredicted RBP15.84■□□□□ 0.13
DDB1-218ENST00000540784 MT-CO1P00395 513 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 HLA-EP13747 358 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 PRKCHP24723 683 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 SERPINB6P35237 376 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 PEX5P50542 639 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 RWDD2BP57060 319 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 GEMIN4P57678 1058 aaKnown RBP15.84■□□□□ 0.13
DDB1-218ENST00000540784 MFSD7Q6UXD7 560 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 LINGO4Q6UY18 593 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 SPOCD1Q6ZMY3 1216 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 RFX6Q8HWS3 928 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 MAML2Q8IZL2 1156 aaPredicted RBP15.84■□□□□ 0.13
DDB1-218ENST00000540784 TSTD1Q8NFU3 115 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.84■□□□□ 0.13
DDB1-218ENST00000540784 FAF2Q96CS3 445 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 MYO19Q96H55 970 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 RBM41Q96IZ5 413 aaKnown RBP15.84■□□□□ 0.13
DDB1-218ENST00000540784 ALS2CR12Q96Q35 445 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 TRMT1Q9NXH9 659 aaKnown RBP15.84■□□□□ 0.13
DDB1-218ENST00000540784 HS3ST2Q9Y278 367 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 MFHAS1Q9Y4C4 1052 aa15.84■□□□□ 0.13
DDB1-218ENST00000540784 CXorf51AA0A1B0GTR3 108 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 A0A1W2PQF6 199 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 TARSL2A2RTX5 802 aaKnown RBP15.83■□□□□ 0.12
DDB1-218ENST00000540784 ZSCAN5CA6NGD5 496 aaPredicted RBP15.83■□□□□ 0.12
DDB1-218ENST00000540784 ATP9BO43861 1147 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 APBB3O95704 486 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 ZFXP17010 805 aaPredicted RBP15.83■□□□□ 0.12
DDB1-218ENST00000540784 CETN2P41208 172 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 MARCKSL1P49006 195 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 NRLP54845 237 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 ARF5P84085 180 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 TFDP2Q14188 446 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 PAFAH1B3Q15102 231 aaKnown RBP15.83■□□□□ 0.12
DDB1-218ENST00000540784 ANGPT1Q15389 498 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 DLG2Q15700 870 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 HNRNPA1L2Q32P51 320 aaKnown RBP15.83■□□□□ 0.12
DDB1-218ENST00000540784 KIAA1211LQ6NV74 962 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 TSSK4Q6SA08 328 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 CCDC50Q8IVM0 306 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 ARHGAP12Q8IWW6 846 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 REXO1L1PQ8IX06 675 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 SH2D3CQ8N5H7 860 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 NPWQ8N729 165 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 PQLC3Q8N755 202 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 ZNF366Q8N895 744 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 NETO2Q8NC67 525 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 ERLEC1Q96DZ1 483 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 HHIPQ96QV1 700 aa15.83■□□□□ 0.12
DDB1-218ENST00000540784 PRMT8Q9NR22 394 aaPredicted RBP15.83■□□□□ 0.12
DDB1-218ENST00000540784 EDDM13A0A1B0GTR0 161 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 TCRBV21S2A2A0A5A6 115 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 K7ERQ8 282 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 K7ESF4 209 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 APOL1O14791 398 aa15.82■□□□□ 0.12
DDB1-218ENST00000540784 SRCP12931 536 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms