RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 SLC34A1Q06495 639 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 TCEA2Q15560 299 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 LRRC38Q5VT99 294 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 ZNF470Q6ECI4 717 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 MFSD7Q6UXD7 560 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 RIPOR1Q6ZS17 1223 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 OR8H2Q8N162 312 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 SPATA20Q8TB22 786 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 SPATA13Q96N96 652 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 ADAM2Q99965 735 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 SLITRK2Q9H156 845 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 ATAD3AQ9NVI7 634 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 INVSQ9Y283 1065 aa6.59□□□□□ -1.36
LSAMP-207ENST00000539563 CHD4Q14839 1912 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 BTN3A1O00481 513 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 RECQL5O94762 991 aaPredicted RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 TRUB2O95900 331 aaKnown RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 LGALS2P05162 132 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 TPH1P17752 444 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ATP6V1C1P21283 382 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 PAICSP22234 425 aaKnown RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 PWP1Q13610 501 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 NECAB2Q7Z6G3 386 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 KRT73Q86Y46 540 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ADHFE1Q8IWW8 467 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 WDR36Q8NI36 951 aaKnown RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 CYP2W1Q8TAV3 490 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 STAG3L4Q8TBR4 150 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 OXNAD1Q96HP4 312 aaPredicted RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 P2RX7Q99572 595 aaKnown RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ACO2Q99798 780 aaKnown RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 MLPHQ9BV36 600 aaPredicted RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ULBP1Q9BZM6 244 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ZYG11BQ9C0D3 744 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 PIF1Q9H611 641 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 LIMD1Q9UGP4 676 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 CORO2BQ9UQ03 480 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 CRYL1Q9Y2S2 319 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 PXDNQ92626 1479 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 AKAP12Q02952 1782 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 FAM237AA0A1B0GTK4 181 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 UQCRBP14927 111 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 CXCR2P25025 360 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 S100A3P33764 101 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 TTPAP49638 278 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 CLCN5P51795 746 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 INAQ16352 499 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ALG11Q2TAA5 492 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 EARS2Q5JPH6 523 aaKnown RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 PPP1R15BQ5SWA1 713 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 NKAPQ8N5F7 415 aaKnown RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 TRPC4APQ8TEL6 797 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 FIG4Q92562 907 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 RNFT2Q96EX2 444 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 SLC28A1O00337 649 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 BCL10O95999 233 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 CES1P23141 567 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 NOS3P29474 1203 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 MRPS6P82932 125 aaKnown RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 SHROOM1Q2M3G4 852 aaPredicted RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ALFQ53S48 1182 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 PDZK1Q5T2W1 519 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 INTS11Q5TA45 600 aaKnown RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 HLA-DQA1Q5Y7H0 255 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 TYW3Q6IPR3 259 aaKnown RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 LRRC74BQ6ZQY2 392 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ZDHHC13Q8IUH4 622 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 PROX1Q92786 737 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ZBTB45Q96K62 511 aaPredicted RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 GTF2A1LQ9UNN4 478 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ZNF510Q9Y2H8 683 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 CLUHO75153 1309 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 MYPNQ86TC9 1320 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 DYTNA2CJ06 578 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 OPLAHO14841 1288 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 CSDE1O75534 798 aaKnown RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ETS1P14921 441 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ATP4AP20648 1035 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ZNF143P52747 638 aaPredicted RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 STX4Q12846 297 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 COX10Q12887 443 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 HECTD3Q5T447 861 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 STXBP5Q5T5C0 1151 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 LPCAT2Q7L5N7 544 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 FAM126BQ8IXS8 530 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ATL1Q8WXF7 558 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 OMDQ99983 421 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 SPRTNQ9H040 489 aaPredicted RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ATP13A3Q9H7F0 1226 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 CCDC167Q9P0B6 97 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 AKAP7Q9P0M2 348 aaPredicted RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 DMGDHQ9UI17 866 aaKnown RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 MYH15Q9Y2K3 1946 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 SLIT3O75094 1523 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 EFCAB10A6NFE3 127 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ZSCAN5CA6NGD5 496 aaPredicted RBP6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ANKDD1BA6NHY2 528 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 PSMD10O75832 226 aa6.58□□□□□ -1.36
LSAMP-207ENST00000539563 ABCB1P08183 1280 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms