RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 BEND5Q7L4P6 421 aa7.08□□□□□ -1.28
PROM1-219ENST00000539194 FASTKD5Q7L8L6 764 aaKnown RBP7.08□□□□□ -1.28
PROM1-219ENST00000539194 LILRA2Q8N149 483 aa7.08□□□□□ -1.28
PROM1-219ENST00000539194 NLRP7Q8WX94 980 aa7.08□□□□□ -1.28
PROM1-219ENST00000539194 UPF1Q92900 1129 aaKnown RBP eCLIP7.08□□□□□ -1.28
PROM1-219ENST00000539194 PPP2R3CQ969Q6 453 aa7.08□□□□□ -1.28
PROM1-219ENST00000539194 BTBD9Q96Q07 612 aa7.08□□□□□ -1.28
PROM1-219ENST00000539194 PPP1R16BQ96T49 567 aa7.08□□□□□ -1.28
PROM1-219ENST00000539194 APOL6Q9BWW8 343 aa7.08□□□□□ -1.28
PROM1-219ENST00000539194 CSADQ9Y600 493 aa7.08□□□□□ -1.28
PROM1-219ENST00000539194 POLBP06746 335 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 LCP1P13796 627 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 CPA3P15088 417 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 PNPLA4P41247 253 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 SERPINB8P50452 374 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 SNX16P57768 344 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 ROR2Q01974 943 aaKnown RBP7.07□□□□□ -1.28
PROM1-219ENST00000539194 IHHQ14623 411 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 IRAK1BP1Q5VVH5 260 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 ARMC3Q5W041 872 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 NOTUMQ6P988 496 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 HPS6Q86YV9 775 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 ZNF683Q8IZ20 524 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 TNS4Q8IZW8 715 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 TMEM102Q8N9M5 508 aaPredicted RBP7.07□□□□□ -1.28
PROM1-219ENST00000539194 KDM1BQ8NB78 822 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 BEST2Q8NFU1 509 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 MFSD3Q96ES6 412 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 TEKT5Q96M29 485 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 GATA5Q9BWX5 397 aaPredicted RBP7.07□□□□□ -1.28
PROM1-219ENST00000539194 BRD8Q9H0E9 1235 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 GOLGA2P5Q9HBQ8 144 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 ARHGEF38Q9NXL2 777 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 PDP2Q9P2J9 529 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 STK39Q9UEW8 545 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 EIF4E1BA6NMX2 242 aaKnown RBP7.07□□□□□ -1.28
PROM1-219ENST00000539194 YJEFN3A6XGL0 299 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 CLDN5O00501 218 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 MAP3K7O43318 606 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 H2AFYO75367 372 aaKnown RBP7.07□□□□□ -1.28
PROM1-219ENST00000539194 DDNO94850 711 aaPredicted RBP7.07□□□□□ -1.28
PROM1-219ENST00000539194 CD4P01730 458 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 C2P06681 752 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 F7P08709 466 aaPredicted RBP7.07□□□□□ -1.28
PROM1-219ENST00000539194 CYP2C9P11712 490 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 NEFHP12036 1026 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 UQCRBP14927 111 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 ERCC2P18074 760 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 AQP4P55087 323 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 USP4Q13107 963 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 APOFQ13790 326 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 SNX17Q15036 470 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.07□□□□□ -1.28
PROM1-219ENST00000539194 GTF3C2Q8WUA4 911 aaPredicted RBP7.07□□□□□ -1.28
PROM1-219ENST00000539194 FATE1Q969F0 183 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 IL12RB2Q99665 862 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 SPATA16Q9BXB7 569 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 CEP41Q9BYV8 373 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 IQCGQ9H095 443 aaKnown RBP7.07□□□□□ -1.28
PROM1-219ENST00000539194 OSBPL2Q9H1P3 480 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 LRRC40Q9H9A6 602 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 UBAP1Q9NZ09 502 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 MAD1L1Q9Y6D9 718 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 MAGEB16A2A368 324 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 TCAF2A6NFQ2 919 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 TRIM64A6NGJ6 449 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 NCAM2O15394 837 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 CHRNGP07510 517 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 SMIM10L2AP0DMW4 78 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 SMIM10L2BP0DMW5 78 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 AKAP5P24588 427 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 PEX2P28328 305 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 POLD2P49005 469 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 SULT1E1P49888 294 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 RAB27AP51159 221 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 TKTL1P51854 596 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 GTF2A2P52657 109 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 SARNPP82979 210 aaKnown RBP7.07□□□□□ -1.28
PROM1-219ENST00000539194 CDC42EP1Q00587 391 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 ZBTB16Q05516 673 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 PEX6Q13608 980 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 ITGA9Q13797 1035 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 GLRA4Q5JXX5 417 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 FAM171BQ6P995 826 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 CES3Q6UWW8 571 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 GALNT7Q86SF2 657 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 MFN1Q8IWA4 741 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 SLC25A41Q8N5S1 370 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 POU5F2Q8N7G0 328 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 C3orf58Q8NDZ4 430 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 SPDYE1Q8NFV5 336 aaPredicted RBP7.07□□□□□ -1.28
PROM1-219ENST00000539194 URGCPQ8TCY9 931 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 PYDC1Q8WXC3 89 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 MOCOSQ96EN8 888 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 LENG8Q96PV6 779 aaPredicted RBP7.07□□□□□ -1.28
PROM1-219ENST00000539194 UHRF1Q96T88 793 aaPredicted RBP7.07□□□□□ -1.28
PROM1-219ENST00000539194 ZBTB26Q9HCK0 441 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 TNFRSF12AQ9NP84 129 aa7.07□□□□□ -1.28
PROM1-219ENST00000539194 PRPF19Q9UMS4 504 aaKnown RBP7.07□□□□□ -1.28
PROM1-219ENST00000539194 RRN3P2A6NIE6 340 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms