RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 ELMSAN1Q6PJG2 1045 aa20.74■□□□□ 0.91
CDH5-202ENST00000539168 GSDMBQ8TAX9 411 aa20.74■□□□□ 0.91
CDH5-202ENST00000539168 ZNF599Q96NL3 588 aa20.74■□□□□ 0.91
CDH5-202ENST00000539168 XPO6Q96QU8 1125 aaKnown RBP20.74■□□□□ 0.91
CDH5-202ENST00000539168 ALG13Q9NP73 1137 aaKnown RBP20.74■□□□□ 0.91
CDH5-202ENST00000539168 ASAH2Q9NR71 780 aa20.74■□□□□ 0.91
CDH5-202ENST00000539168 RBM22Q9NW64 420 aaKnown RBP eCLIP20.74■□□□□ 0.91
CDH5-202ENST00000539168 LSM7Q9UK45 103 aaKnown RBP20.74■□□□□ 0.91
CDH5-202ENST00000539168 PCDHA11Q9Y5I1 949 aa20.74■□□□□ 0.91
CDH5-202ENST00000539168 MAD1L1Q9Y6D9 718 aa20.74■□□□□ 0.91
CDH5-202ENST00000539168 IKBKGQ9Y6K9 419 aa20.74■□□□□ 0.91
CDH5-202ENST00000539168 ANAPC1Q9H1A4 1944 aa20.74■□□□□ 0.91
CDH5-202ENST00000539168 TCRBV9S1A1TA0A576 114 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 TYW5A2RUC4 315 aaKnown RBP20.73■□□□□ 0.91
CDH5-202ENST00000539168 POC1B-GALNT4F8VUJ3 575 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 SHOX2O60902 331 aaPredicted RBP20.73■□□□□ 0.91
CDH5-202ENST00000539168 DDX6P26196 483 aaKnown RBP eCLIP20.73■□□□□ 0.91
CDH5-202ENST00000539168 HOXA9P31269 272 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 MSH2P43246 934 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 MARC1Q5VT66 337 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 PLPP4Q5VZY2 271 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 ZNF449Q6P9G9 518 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 ARHGAP36Q6ZRI8 547 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 CAPN12Q6ZSI9 719 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 SETD3Q86TU7 594 aaPredicted RBP20.73■□□□□ 0.91
CDH5-202ENST00000539168 IGDCC3Q8IVU1 814 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 CNTD1Q8N815 330 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 LEMD2Q8NC56 503 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 HMCESQ96FZ2 354 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 TRPC7Q9HCX4 862 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 CASS4Q9NQ75 786 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 AGO1Q9UL18 857 aaKnown RBP20.73■□□□□ 0.91
CDH5-202ENST00000539168 MYO18AQ92614 2054 aaKnown RBP20.73■□□□□ 0.91
CDH5-202ENST00000539168 SHROOM3Q8TF72 1996 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 GOLGA6L7A0A1B0GV03 622 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 A0A1B0GVM2 712 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 TCAF2A6NFQ2 919 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 SPATA31D3P0C874 917 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 PGAM1P18669 254 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 SLC7A9P82251 487 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 SMAD3P84022 425 aaKnown RBP20.73■□□□□ 0.91
CDH5-202ENST00000539168 SERINC3Q13530 473 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 TMCO4Q5TGY1 634 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 ADGRD1Q6QNK2 874 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 ZNF783Q6ZMS7 281 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 SPATA31D4Q6ZUB0 917 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 TMC8Q8IU68 726 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 BBS5Q8N3I7 341 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 MICAL1Q8TDZ2 1067 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 CFAP36Q96G28 342 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 DHRS4Q9BTZ2 278 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 LRRC3Q9BY71 257 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 SAMD15Q9P1V8 674 aa20.73■□□□□ 0.91
CDH5-202ENST00000539168 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.72■□□□□ 0.91
CDH5-202ENST00000539168 TRAV19A0A0A6YYK7 116 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 SRRM3A6NNA2 597 aaPredicted RBP20.72■□□□□ 0.91
CDH5-202ENST00000539168 PRKCHP24723 683 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 SLC6A4P31645 630 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 MDH1P40925 334 aaKnown RBP20.72■□□□□ 0.91
CDH5-202ENST00000539168 ATP1A2P50993 1020 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 IRAK1P51617 712 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 CLCN4P51793 760 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 CDH17Q12864 832 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 ZNF177Q13360 481 aaPredicted RBP20.72■□□□□ 0.91
CDH5-202ENST00000539168 MPP3Q13368 585 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 LGSNQ5TDP6 509 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 STEAP4Q687X5 459 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 EXOC3L1Q86VI1 746 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 ZNF354CQ86Y25 554 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 CCDC117Q8IWD4 279 aaPredicted RBP20.72■□□□□ 0.91
CDH5-202ENST00000539168 TEX26Q8N6G2 289 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 DNAAF3Q8N9W5 541 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 SLC25A51Q9H1U9 297 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 VPS45Q9NRW7 570 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 GKN1Q9NS71 199 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 ZMYM5Q9UJ78 669 aa20.72■□□□□ 0.91
CDH5-202ENST00000539168 ZFP37Q9Y6Q3 630 aaPredicted RBP20.72■□□□□ 0.91
CDH5-202ENST00000539168 ILVBLA1L0T0 632 aa20.71■□□□□ 0.91
CDH5-202ENST00000539168 KLKB1P03952 638 aa20.71■□□□□ 0.91
CDH5-202ENST00000539168 NAB1Q13506 487 aa20.71■□□□□ 0.91
CDH5-202ENST00000539168 TMED2Q15363 201 aa20.71■□□□□ 0.91
CDH5-202ENST00000539168 CASC4Q6P4E1 433 aa20.71■□□□□ 0.91
CDH5-202ENST00000539168 UNC5AQ6ZN44 842 aa20.71■□□□□ 0.91
CDH5-202ENST00000539168 AGGF1Q8N302 714 aaeCLIP20.71■□□□□ 0.91
CDH5-202ENST00000539168 USP33Q8TEY7 942 aa20.71■□□□□ 0.91
CDH5-202ENST00000539168 TTC17Q96AE7 1141 aa20.71■□□□□ 0.91
CDH5-202ENST00000539168 CENPTQ96BT3 561 aa20.71■□□□□ 0.91
CDH5-202ENST00000539168 ZFRQ96KR1 1074 aaKnown RBP20.71■□□□□ 0.91
CDH5-202ENST00000539168 PAFAH2Q99487 392 aa20.71■□□□□ 0.91
CDH5-202ENST00000539168 GORASP1Q9BQQ3 440 aa20.71■□□□□ 0.91
CDH5-202ENST00000539168 MLPHQ9BV36 600 aaPredicted RBP20.71■□□□□ 0.91
CDH5-202ENST00000539168 IL22Q9GZX6 179 aa20.71■□□□□ 0.91
CDH5-202ENST00000539168 MTCL1Q9Y4B5 1905 aaKnown RBP20.71■□□□□ 0.91
CDH5-202ENST00000539168 IQANK1A0A1B0GTG1 560 aa20.7■□□□□ 0.91
CDH5-202ENST00000539168 PEX11BO96011 259 aa20.7■□□□□ 0.91
CDH5-202ENST00000539168 POLBP06746 335 aa20.7■□□□□ 0.91
CDH5-202ENST00000539168 INHBAP08476 426 aa20.7■□□□□ 0.91
CDH5-202ENST00000539168 HNRNPA1P09651 372 aaKnown RBP eCLIP20.7■□□□□ 0.91
CDH5-202ENST00000539168 GCAP28676 217 aa20.7■□□□□ 0.91
CDH5-202ENST00000539168 GRIA1P42261 906 aa20.7■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms