RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ABCE1P61221 599 aaKnown RBP25.38■■□□□ 1.65
RAB40C-204ENST00000538492 PRPSAP1Q14558 356 aa25.38■■□□□ 1.65
RAB40C-204ENST00000538492 CCDC153Q494R4 210 aa25.38■■□□□ 1.65
RAB40C-204ENST00000538492 URGCPQ8TCY9 931 aa25.38■■□□□ 1.65
RAB40C-204ENST00000538492 ISL2Q96A47 359 aa25.38■■□□□ 1.65
RAB40C-204ENST00000538492 SOX13Q9UN79 622 aa25.38■■□□□ 1.65
RAB40C-204ENST00000538492 ERFP50548 548 aa25.37■■□□□ 1.65
RAB40C-204ENST00000538492 CDH17Q12864 832 aa25.37■■□□□ 1.65
RAB40C-204ENST00000538492 CCDC6Q16204 474 aa25.37■■□□□ 1.65
RAB40C-204ENST00000538492 DTX3LQ8TDB6 740 aa25.37■■□□□ 1.65
RAB40C-204ENST00000538492 TRIB2Q92519 343 aa25.37■■□□□ 1.65
RAB40C-204ENST00000538492 ZNF419Q96HQ0 510 aaPredicted RBP25.37■■□□□ 1.65
RAB40C-204ENST00000538492 PKMYT1Q99640 499 aa25.37■■□□□ 1.65
RAB40C-204ENST00000538492 ADAM2Q99965 735 aa25.37■■□□□ 1.65
RAB40C-204ENST00000538492 NEU3Q9UQ49 428 aa25.37■■□□□ 1.65
RAB40C-204ENST00000538492 MEI4A8MW99 385 aa25.37■■□□□ 1.65
RAB40C-204ENST00000538492 CYBAP13498 195 aa25.37■■□□□ 1.65
RAB40C-204ENST00000538492 CRHR2Q13324 411 aa25.37■■□□□ 1.65
RAB40C-204ENST00000538492 THOC5Q13769 683 aaKnown RBP25.37■■□□□ 1.65
RAB40C-204ENST00000538492 TRIM68Q6AZZ1 485 aa25.37■■□□□ 1.65
RAB40C-204ENST00000538492 NAPEPLDQ6IQ20 393 aa25.37■■□□□ 1.65
RAB40C-204ENST00000538492 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.37■■□□□ 1.65
RAB40C-204ENST00000538492 ARHGAP24Q8N264 748 aa25.37■■□□□ 1.65
RAB40C-204ENST00000538492 VPS39Q96JC1 886 aa25.37■■□□□ 1.65
RAB40C-204ENST00000538492 SIKE1Q9BRV8 207 aa25.37■■□□□ 1.65
RAB40C-204ENST00000538492 CPSF2Q9P2I0 782 aaKnown RBP25.37■■□□□ 1.65
RAB40C-204ENST00000538492 MAGEB16A2A368 324 aa25.36■■□□□ 1.65
RAB40C-204ENST00000538492 C2P06681 752 aa25.36■■□□□ 1.65
RAB40C-204ENST00000538492 ZNF135P52742 658 aaPredicted RBP25.36■■□□□ 1.65
RAB40C-204ENST00000538492 RSPH1Q8WYR4 309 aa25.36■■□□□ 1.65
RAB40C-204ENST00000538492 NAF1Q96HR8 494 aaKnown RBP25.36■■□□□ 1.65
RAB40C-204ENST00000538492 THTPAQ9BU02 230 aa25.36■■□□□ 1.65
RAB40C-204ENST00000538492 ARHGAP39Q9C0H5 1083 aa25.36■■□□□ 1.65
RAB40C-204ENST00000538492 SLC39A10Q9ULF5 831 aa25.36■■□□□ 1.65
RAB40C-204ENST00000538492 CYP11A1P05108 521 aa25.36■■□□□ 1.65
RAB40C-204ENST00000538492 IDH3AP50213 366 aa25.36■■□□□ 1.65
RAB40C-204ENST00000538492 TRIM32Q13049 653 aa25.36■■□□□ 1.65
RAB40C-204ENST00000538492 NAPRTQ6XQN6 538 aa25.36■■□□□ 1.65
RAB40C-204ENST00000538492 ATPAF2Q8N5M1 289 aa25.36■■□□□ 1.65
RAB40C-204ENST00000538492 OSBPL2Q9H1P3 480 aa25.36■■□□□ 1.65
RAB40C-204ENST00000538492 SPC25Q9HBM1 224 aa25.36■■□□□ 1.65
RAB40C-204ENST00000538492 IRAK2O43187 625 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 ZNF623O75123 536 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 PAGE1O75459 146 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 PSMG1O95456 288 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 TBCCQ15814 346 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 RABGAP1LQ5R372 815 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 POU5F2Q8N7G0 328 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 STMN2Q93045 179 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 NDFIP2Q9NV92 336 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 PLA2G4CQ9UP65 541 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 HTTP42858 3142 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 A0A0U1RQF3 1178 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 IGLV3-25P01717 112 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 OR4Q2P0C623 313 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 GRIK1P39086 918 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 SLC5A3P53794 718 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 USP4Q13107 963 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 POU6F1Q14863 301 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 BTBD8Q5XKL5 378 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 ARHGAP12Q8IWW6 846 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 IPMKQ8NFU5 416 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 AGR3Q8TD06 166 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 MOCOSQ96EN8 888 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 ZFYVE28Q9HCC9 887 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 ACSS2Q9NR19 701 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 LRRC42Q9Y546 428 aa25.35■■□□□ 1.65
RAB40C-204ENST00000538492 G3V2L1 256 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 M0QZQ0 153 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 TIMM44O43615 452 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 SIN3BO75182 1162 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 MPOP05164 745 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 ATP5BP06576 529 aaKnown RBP25.34■■□□□ 1.65
RAB40C-204ENST00000538492 ASGR1P07306 291 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 COG7P83436 770 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 FRG1Q14331 258 aaKnown RBP25.34■■□□□ 1.65
RAB40C-204ENST00000538492 GRM3Q14832 879 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 SCUBE1Q8IWY4 988 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 CASP10Q92851 521 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 ARHGEF38Q9NXL2 777 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 GABRQQ9UN88 632 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 MAGEC1O60732 1142 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 MOCS2O96007 188 aaPredicted RBP25.34■■□□□ 1.65
RAB40C-204ENST00000538492 AOC1P19801 751 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 HARS2P49590 506 aaKnown RBP25.34■■□□□ 1.65
RAB40C-204ENST00000538492 TUSC3Q13454 348 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 LPIN1Q14693 890 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 RAPH1Q70E73 1250 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 CLEC14AQ86T13 490 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 SHCBP1LQ9BZQ2 653 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 NMRAL1Q9HBL8 299 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 STOML1Q9UBI4 398 aa25.34■■□□□ 1.65
RAB40C-204ENST00000538492 EIF4E1BA6NMX2 242 aaKnown RBP25.33■■□□□ 1.65
RAB40C-204ENST00000538492 ZNF195O14628 629 aa25.33■■□□□ 1.65
RAB40C-204ENST00000538492 CDK7P50613 346 aa25.33■■□□□ 1.65
RAB40C-204ENST00000538492 RAB27AP51159 221 aa25.33■■□□□ 1.65
RAB40C-204ENST00000538492 RAP1GDS1P52306 607 aa25.33■■□□□ 1.65
RAB40C-204ENST00000538492 TSPY1Q01534 308 aa25.33■■□□□ 1.65
RAB40C-204ENST00000538492 GRIK3Q13003 919 aa25.33■■□□□ 1.65
RAB40C-204ENST00000538492 KDELC2Q7Z4H8 507 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms