RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TMEM145Q8NBT3 493 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 OR13H1Q8NG92 308 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 OR52K2Q8NGK3 314 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 KCNE4Q8WWG9 221 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 TRIM62Q9BVG3 475 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 SEMA4CQ9C0C4 833 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 FAM204AQ9H8W3 233 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 PREBQ9HCU5 417 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 COX16Q9P0S2 106 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 PPM1HQ9ULR3 514 aa14.4□□□□□ -0.1
SMARCA4-206ENST00000538456 HECTD1Q9ULT8 2610 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 A0A1W2PQU0 124 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 KCNU1A8MYU2 1149 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 E5RJQ4 531 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 KLK10O43240 276 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 ATP9BO43861 1147 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 PIAS2O75928 621 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 GPD2P43304 727 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 IRAK1P51617 712 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 PLK1P53350 603 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 UCNP55089 124 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 CLDN2P57739 230 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 DLG2Q15700 870 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 ZNF542PQ5EBM4 170 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 PIP5KL1Q5T9C9 394 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 TTC39BQ5VTQ0 682 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 CDCP2Q5VXM1 449 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 DENND1BQ6P3S1 775 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 ARHGEF19Q8IW93 802 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 ERCC4Q92889 916 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 RNF34Q969K3 372 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 APOLD1Q96LR9 279 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 RPRD1AQ96P16 312 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 PRMT1Q99873 361 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 ABCG4Q9H172 646 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 POLR1BQ9H9Y6 1135 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 POPDC2Q9HBU9 364 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 KLHL11Q9NVR0 708 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 RMND1Q9NWS8 449 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 VPS28Q9UK41 221 aa14.39□□□□□ -0.11
SMARCA4-206ENST00000538456 TRPM6Q9BX84 2022 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 CYSRT1A8MQ03 144 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 KPNA3O00505 521 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 MCF2LO15068 1137 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 ALOX15BO15296 676 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 NEBLO76041 1014 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 IGLV3-25P01717 112 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 CTSLP07711 333 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 GIMD1P0DJR0 217 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 ALPPL2P10696 532 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 KRT5P13647 590 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 AKT2P31751 481 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 GGCXP38435 758 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 ACADSBP45954 432 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 RPL34P49207 117 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 YWHAZP63104 245 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 TAF5Q15542 800 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 ZNF284Q2VY69 593 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 C3orf38Q5JPI3 329 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 ZNF658Q5TYW1 1059 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 FBXL22Q6P050 247 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 BEND5Q7L4P6 421 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 LSMEM2Q8N112 164 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 FAM181AQ8N9Y4 354 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 MAPK15Q8TD08 544 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 ALG14Q96F25 216 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 NOX5Q96PH1 765 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 FEM1AQ9BSK4 669 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 DDIT4Q9NX09 232 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 DNAJC28Q9NX36 388 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 NLGN3Q9NZ94 848 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 SLC12A6Q9UHW9 1150 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 VANGL2Q9ULK5 521 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 KIF26BQ2KJY2 2108 aa14.38□□□□□ -0.11
SMARCA4-206ENST00000538456 LY6G6EA0A0G2JKS1 128 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 A0A1W2PQ27 194 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 A0A1W2PQ64 194 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 DXOO77932 396 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 KRT10P13645 584 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 HNRNPA2B1P22626 353 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 LSSP48449 732 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 OXCT1P55809 520 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 ERVPABLB-1P60509 514 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 LRRC63Q05C16 580 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 CCDC40Q4G0X9 1142 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 OR6B2Q6IFH4 312 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 PTAR1Q7Z6K3 402 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 HORMAD1Q86X24 394 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 SLC22A18ASQ8N1D0 253 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 SH2D3CQ8N5H7 860 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 LMO3Q8TAP4 145 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 ARRDC3Q96B67 414 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 CCDC34Q96HJ3 373 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 VCPIP1Q96JH7 1222 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 SLC4A5Q9BY07 1137 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 MUC3BQ9H195 1237 aa14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 METTL14Q9HCE5 456 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-206ENST00000538456 ASCL3Q9NQ33 180 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms