RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 A0A1W2PQH9 124 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 DFFAO00273 331 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 TPH1P17752 444 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 CCND1P24385 295 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 GMPRP36959 345 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 FAM189BP81408 668 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 NRG1Q02297 640 aaPredicted RBP14.29□□□□□ -0.12
LIMK1-208ENST00000538333 PRPSAP1Q14558 356 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 E2F5Q15329 346 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 AFMIDQ63HM1 303 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 RNF180Q86T96 592 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 KCNMB4Q86W47 210 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 LONP2Q86WA8 852 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 ATPAF2Q8N5M1 289 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 USP33Q8TEY7 942 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 AZIN2Q96A70 460 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 NSL1Q96IY1 281 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 ZNF778Q96MU6 729 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 FCRL5Q96RD9 977 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 KIFC1Q9BW19 673 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 SLC39A8Q9C0K1 460 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 CATSPERBQ9H7T0 1116 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 MARCOQ9UEW3 520 aaPredicted RBP14.29□□□□□ -0.12
LIMK1-208ENST00000538333 NUDT5Q9UKK9 219 aa14.29□□□□□ -0.12
LIMK1-208ENST00000538333 CAPN14A8MX76 684 aa14.28□□□□□ -0.12
LIMK1-208ENST00000538333 AP3B1O00203 1094 aa14.28□□□□□ -0.12
LIMK1-208ENST00000538333 PSMD3O43242 534 aa14.28□□□□□ -0.12
LIMK1-208ENST00000538333 ITM2AO43736 263 aa14.28□□□□□ -0.12
LIMK1-208ENST00000538333 CCDC22O60826 627 aa14.28□□□□□ -0.12
LIMK1-208ENST00000538333 F7P08709 466 aaPredicted RBP14.28□□□□□ -0.12
LIMK1-208ENST00000538333 KCNA4P22459 653 aa14.28□□□□□ -0.12
LIMK1-208ENST00000538333 DNAJB2P25686 324 aa14.28□□□□□ -0.12
LIMK1-208ENST00000538333 NMBRP28336 390 aa14.28□□□□□ -0.12
LIMK1-208ENST00000538333 SERPINB8P50452 374 aa14.28□□□□□ -0.12
LIMK1-208ENST00000538333 NOMO2Q5JPE7 1267 aa14.28□□□□□ -0.12
LIMK1-208ENST00000538333 ATG14Q6ZNE5 492 aa14.28□□□□□ -0.12
LIMK1-208ENST00000538333 SPATA22Q8NHS9 363 aa14.28□□□□□ -0.12
LIMK1-208ENST00000538333 WWP1Q9H0M0 922 aa14.28□□□□□ -0.12
LIMK1-208ENST00000538333 ABI2Q9NYB9 513 aaPredicted RBP14.28□□□□□ -0.12
LIMK1-208ENST00000538333 COPG2Q9UBF2 871 aa14.28□□□□□ -0.12
LIMK1-208ENST00000538333 MATN3O15232 486 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 MT-CYBP00156 380 aaPredicted RBP14.27□□□□□ -0.12
LIMK1-208ENST00000538333 KITP10721 976 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 CALB2P22676 271 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 CSRP3P50461 194 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 CSE1LP55060 971 aaKnown RBP14.27□□□□□ -0.12
LIMK1-208ENST00000538333 AQP5P55064 265 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 CLEC14AQ86T13 490 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 LINC00523Q86TU6 105 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 C10orf107Q8IVU9 208 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 SCN4BQ8IWT1 228 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 PLD6Q8N2A8 252 aaKnown RBP14.27□□□□□ -0.12
LIMK1-208ENST00000538333 OR6Y1Q8NGX8 325 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 FUBP3Q96I24 572 aaKnown RBP eCLIP14.27□□□□□ -0.12
LIMK1-208ENST00000538333 HHIPL1Q96JK4 782 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 BTBD10Q9BSF8 475 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 CADM1Q9BY67 442 aaKnown RBP14.27□□□□□ -0.12
LIMK1-208ENST00000538333 TRPV6Q9H1D0 765 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 EBF2Q9HAK2 575 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 TBC1D13Q9NVG8 400 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 ZNF358Q9NW07 568 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 MAGED2Q9UNF1 606 aaPredicted RBP14.27□□□□□ -0.12
LIMK1-208ENST00000538333 SCML2Q9UQR0 700 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 AAR2Q9Y312 384 aaKnown RBP14.27□□□□□ -0.12
LIMK1-208ENST00000538333 HS3ST4Q9Y661 456 aa14.27□□□□□ -0.12
LIMK1-208ENST00000538333 E9PAM4 449 aa14.27□□□□□ -0.13
LIMK1-208ENST00000538333 LYPLA1O75608 230 aaPredicted RBP14.27□□□□□ -0.13
LIMK1-208ENST00000538333 SERPINE1P05121 402 aa14.27□□□□□ -0.13
LIMK1-208ENST00000538333 GM2AP17900 193 aa14.27□□□□□ -0.13
LIMK1-208ENST00000538333 SLC1A6P48664 564 aa14.27□□□□□ -0.13
LIMK1-208ENST00000538333 MPP3Q13368 585 aa14.27□□□□□ -0.13
LIMK1-208ENST00000538333 SDHAF4Q5VUM1 108 aa14.27□□□□□ -0.13
LIMK1-208ENST00000538333 DENND5AQ6IQ26 1287 aa14.27□□□□□ -0.13
LIMK1-208ENST00000538333 MSANTD2Q6P1R3 559 aa14.27□□□□□ -0.13
LIMK1-208ENST00000538333 C14orf80Q86SX3 495 aa14.27□□□□□ -0.13
LIMK1-208ENST00000538333 MON1AQ86VX9 555 aa14.27□□□□□ -0.13
LIMK1-208ENST00000538333 RTL3Q8N8U3 475 aaKnown RBP14.27□□□□□ -0.13
LIMK1-208ENST00000538333 ATXN7L3BQ96GX2 97 aa14.27□□□□□ -0.13
LIMK1-208ENST00000538333 SLC39A13Q96H72 371 aa14.27□□□□□ -0.13
LIMK1-208ENST00000538333 SERPINB11Q96P15 392 aa14.27□□□□□ -0.13
LIMK1-208ENST00000538333 GLOD4Q9HC38 313 aa14.27□□□□□ -0.13
LIMK1-208ENST00000538333 C20orf96Q9NUD7 363 aaPredicted RBP14.27□□□□□ -0.13
LIMK1-208ENST00000538333 ARMCX1Q9P291 453 aa14.27□□□□□ -0.13
LIMK1-208ENST00000538333 DNAJB4Q9UDY4 337 aa14.27□□□□□ -0.13
LIMK1-208ENST00000538333 RPL26L1Q9UNX3 145 aaKnown RBP14.27□□□□□ -0.13
LIMK1-208ENST00000538333 WASH4PA8MWX3 477 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 ATP5BP06576 529 aaKnown RBP14.26□□□□□ -0.13
LIMK1-208ENST00000538333 ARRB2P32121 409 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 ADRA1AP35348 466 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 GPR15P49685 360 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 TUBP50607 506 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 GTF2A1P52655 376 aaPredicted RBP14.26□□□□□ -0.13
LIMK1-208ENST00000538333 MLLT6P55198 1093 aaPredicted RBP14.26□□□□□ -0.13
LIMK1-208ENST00000538333 SP3Q02447 781 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 CCDC153Q494R4 210 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 PIK3R6Q5UE93 754 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 TREML1Q86YW5 311 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 DCP1BQ8IZD4 617 aaKnown RBP14.26□□□□□ -0.13
LIMK1-208ENST00000538333 NUP93Q8N1F7 819 aa14.26□□□□□ -0.13
LIMK1-208ENST00000538333 PPP1R14CQ8TAE6 165 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms