RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ERGIC3Q9Y282 383 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 PCDHB2Q9Y5E7 798 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 M0R036 132 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 SSTR1P30872 391 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 PSMC5P62195 406 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 GRIK3Q13003 919 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 ANKRD23Q86SG2 305 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 AKAP1Q92667 903 aaKnown RBP eCLIP5.75□□□□□ -1.49
CSMD1-215ENST00000537824 FAM20AQ96MK3 541 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 KATNAL1Q9BW62 490 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 SLC6A15Q9H2J7 730 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 TNCP24821 2201 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 H7C0S8 307 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 PIGNO95427 931 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 GCP02774 474 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 ARF4P18085 180 aaPredicted RBP5.75□□□□□ -1.49
CSMD1-215ENST00000537824 MAZP56270 477 aaKnown RBP5.75□□□□□ -1.49
CSMD1-215ENST00000537824 GNG2P59768 71 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 CDH18Q13634 790 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 PTPAQ15257 358 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 KHDC1Q4VXA5 237 aaKnown RBP5.75□□□□□ -1.49
CSMD1-215ENST00000537824 RBM20Q5T481 1227 aaKnown RBP5.75□□□□□ -1.49
CSMD1-215ENST00000537824 LCN1P1Q5VSP4 162 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 OFCC1Q8IZS5 231 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 TMEM132CQ8N3T6 1108 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 LARGE2Q8N3Y3 721 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 PIK3R3Q92569 461 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 RMDN3Q96TC7 470 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 HGH1Q9BTY7 390 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 EPB41L4BQ9H329 900 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 CCDC167Q9P0B6 97 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 CLCA2Q9UQC9 943 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 H3BM21 787 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 ECE2O60344 883 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 NOL4O94818 638 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 PGK1P00558 417 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 ABCG1P45844 678 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 RAP1GAPP47736 663 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 GALNT5Q7Z7M9 940 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 MYO1HQ8N1T3 1032 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 CCDC185Q8N715 623 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 FRMD8P1Q9BZ68 369 aaPredicted RBP5.75□□□□□ -1.49
CSMD1-215ENST00000537824 TRIT1Q9H3H1 467 aaKnown RBP5.75□□□□□ -1.49
CSMD1-215ENST00000537824 MKLN1Q9UL63 735 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 LYVE1Q9Y5Y7 322 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 TRIM38O00635 465 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 ZBTB5O15062 677 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 SPTLC1O15269 473 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 RBP1P09455 135 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 PLCL1Q15111 1095 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 ZCCHC8Q6NZY4 707 aaKnown RBP5.75□□□□□ -1.49
CSMD1-215ENST00000537824 ZFAND2BQ8WV99 257 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 HIPK3Q9H422 1215 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 PRR5-ARHGAP8B1AHC4 643 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 EEF2KO00418 725 aaKnown RBP5.75□□□□□ -1.49
CSMD1-215ENST00000537824 MDM4O15151 490 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 GLRA2P23416 452 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 RPL14P50914 215 aaKnown RBP5.75□□□□□ -1.49
CSMD1-215ENST00000537824 ARHGAP8P85298 464 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 FAM131AQ6UXB0 335 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 ARHGAP27Q6ZUM4 889 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 FASTKD5Q7L8L6 764 aaKnown RBP5.75□□□□□ -1.49
CSMD1-215ENST00000537824 HAUS6Q7Z4H7 955 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 CBR4Q8N4T8 237 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 MAB21L3Q8N8X9 362 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 TTC29Q8NA56 475 aaPredicted RBP5.75□□□□□ -1.49
CSMD1-215ENST00000537824 L3MBTL3Q96JM7 780 aaPredicted RBP5.75□□□□□ -1.49
CSMD1-215ENST00000537824 ANKRD36A6QL64 1941 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 CLDN25C9JDP6 229 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 DHFRP00374 187 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 PDGFRBP09619 1106 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 MMP13P45452 471 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 USPL1Q5W0Q7 1092 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF613Q6PF04 617 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 ECHDC2Q86YB7 292 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 SYNPOQ8N3V7 929 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 SPPL2AQ8TCT8 520 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 FAM172AQ8WUF8 416 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 DIRAS2Q96HU8 199 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 TPK1Q9H3S4 243 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 TMEM8AQ9HCN3 771 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 SLC5A4Q9NY91 659 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 NKX1-2Q9UD57 310 aaPredicted RBP5.75□□□□□ -1.49
CSMD1-215ENST00000537824 PRKAB1Q9Y478 270 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 GNG14A0A1W2PPG7 69 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 C12orf71A8MTZ7 269 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 UBXN8O00124 270 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 SLC2A4P14672 509 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 VARSP26640 1264 aaKnown RBP5.75□□□□□ -1.49
CSMD1-215ENST00000537824 CNTN1Q12860 1018 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 ADGRE1Q14246 886 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 ZRANB3Q5FWF4 1079 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 CLYBLQ8N0X4 340 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 TTC39CQ8N584 583 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 SLC5A5Q92911 643 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 STARD7Q9NQZ5 370 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 CLEC4AQ9UMR7 237 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 VPS9D1Q9Y2B5 631 aa5.75□□□□□ -1.49
CSMD1-215ENST00000537824 SNAP23O00161 211 aa5.74□□□□□ -1.49
CSMD1-215ENST00000537824 MAP3K6O95382 1288 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms