RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 NMRAL1Q9HBL8 299 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 VTA1Q9NP79 307 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 MRPL40Q9NQ50 206 aaKnown RBP12.39□□□□□ -0.43
CPSF7-218ENST00000537641 MAN1C1Q9NR34 630 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 OXSMQ9NWU1 459 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 IRAK4Q9NWZ3 460 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 FZD10Q9ULW2 581 aa12.39□□□□□ -0.43
CPSF7-218ENST00000537641 RBM47A0AV96 593 aaKnown RBP12.38□□□□□ -0.43
CPSF7-218ENST00000537641 GABBR2O75899 941 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 CABYRO75952 493 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 PYGLP06737 847 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 INSRRP14616 1297 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 MPSTP25325 297 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 GJA5P36382 358 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 MLH1P40692 756 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 RPL14P50914 215 aaKnown RBP12.38□□□□□ -0.43
CPSF7-218ENST00000537641 USP46P62068 366 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 NSUN2Q08J23 767 aaKnown RBP eCLIP12.38□□□□□ -0.43
CPSF7-218ENST00000537641 BST2Q10589 180 aaKnown RBP12.38□□□□□ -0.43
CPSF7-218ENST00000537641 PAFAH1B3Q15102 231 aaKnown RBP12.38□□□□□ -0.43
CPSF7-218ENST00000537641 MYLK3Q32MK0 819 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 ZNF792Q3KQV3 632 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 LSM12Q3MHD2 195 aaKnown RBP12.38□□□□□ -0.43
CPSF7-218ENST00000537641 TAPT1Q6NXT6 567 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 TMEM135Q86UB9 458 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 GPRC5AQ8NFJ5 357 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 PPTC7Q8NI37 304 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 URGCPQ8TCY9 931 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 EMID1Q96A84 441 aaPredicted RBP12.38□□□□□ -0.43
CPSF7-218ENST00000537641 ZNF668Q96K58 619 aaPredicted RBP12.38□□□□□ -0.43
CPSF7-218ENST00000537641 CNBD2Q96M20 576 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 TSNARE1Q96NA8 513 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 CATSPER2Q96P56 530 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 CDRT15Q96T59 188 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 HAUS8Q9BT25 410 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 GRIP2Q9C0E4 1043 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 MRGBPQ9NV56 204 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 NSMCE4AQ9NXX6 385 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.38□□□□□ -0.435e-9■■□□□ 12.4
CPSF7-218ENST00000537641 HACD3Q9P035 362 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 HSFX1Q9UBD0 423 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 GNEQ9Y223 722 aaKnown RBP12.38□□□□□ -0.43
CPSF7-218ENST00000537641 CDYLQ9Y232 598 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 MFHAS1Q9Y4C4 1052 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 RAD54BQ9Y620 910 aa12.38□□□□□ -0.43
CPSF7-218ENST00000537641 ERI2A8K979 691 aaKnown RBP12.37□□□□□ -0.43
CPSF7-218ENST00000537641 TRIM38O00635 465 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 AP2A1O95782 977 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 C2P06681 752 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 IQCF3P0C7M6 154 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 FAM200BP0CF97 657 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 CSRP3P50461 194 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 ATXN1P54253 815 aaKnown RBP12.37□□□□□ -0.43
CPSF7-218ENST00000537641 BCAT1P54687 386 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 IGBP1P78318 339 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 FSTL4Q6MZW2 842 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 ACOT1Q86TX2 421 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 ZNF410Q86VK4 478 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 ZNF567Q8N184 647 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 TMEM102Q8N9M5 508 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-218ENST00000537641 BHLHE22Q8NFJ8 381 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-218ENST00000537641 MIPOL1Q8TD10 442 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 TRPC4APQ8TEL6 797 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 PDCD6IPQ8WUM4 868 aaKnown RBP12.37□□□□□ -0.43
CPSF7-218ENST00000537641 TOP1MTQ969P6 601 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 PPP1R14BQ96C90 147 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 RCN3Q96D15 328 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 FCRL3Q96P31 734 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-218ENST00000537641 LGMNQ99538 433 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 MRPL45Q9BRJ2 306 aaKnown RBP12.37□□□□□ -0.43
CPSF7-218ENST00000537641 SENP6Q9GZR1 1112 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-218ENST00000537641 COPS7BQ9H9Q2 264 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-218ENST00000537641 WDR41Q9HAD4 459 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 EFCAB1Q9HAE3 211 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 CASS4Q9NQ75 786 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 BFARQ9NZS9 450 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 DERAQ9Y315 318 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-218ENST00000537641 MAGEB16A2A368 324 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 CCDC160A6NGH7 325 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-218ENST00000537641 F5H423 210 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-218ENST00000537641 GRID2O43424 1007 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 DAB1O75553 588 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 CYP2C9P11712 490 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 PSMD8P48556 350 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 MPP3Q13368 585 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 CEACAM7Q14002 265 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 MYBPC3Q14896 1274 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 SOWAHAQ2M3V2 549 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 ANO4Q32M45 955 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 PPM1LQ5SGD2 360 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 BSPRYQ5W0U4 402 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 ZNF467Q7Z7K2 595 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-218ENST00000537641 CHERPQ8IWX8 916 aaKnown RBP12.37□□□□□ -0.43
CPSF7-218ENST00000537641 TNS4Q8IZW8 715 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 LILRA2Q8N149 483 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 ZFP28Q8NHY6 868 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 NLRP7Q8WX94 980 aa12.37□□□□□ -0.43
CPSF7-218ENST00000537641 SLC10A4Q96EP9 437 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms