RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 SMOQ99835 787 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 UBP1Q9NZI7 540 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 ERI2A8K979 691 aaKnown RBP14.6□□□□□ -0.07
USP44-203ENST00000537435 C9IYK1 514 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 TIMM44O43615 452 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 AP1G2O75843 785 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 USP17L7P0C7H9 530 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 HCAR3P49019 387 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 CSE1LP55060 971 aaKnown RBP14.6□□□□□ -0.07
USP44-203ENST00000537435 GJA9P57773 515 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 TBL3Q12788 808 aaKnown RBP14.6□□□□□ -0.07
USP44-203ENST00000537435 KLF10Q13118 480 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 ITPRIPL1Q6GPH6 555 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 PAXIP1Q6ZW49 1069 aaPredicted RBP14.6□□□□□ -0.07
USP44-203ENST00000537435 HPS6Q86YV9 775 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 HIPK4Q8NE63 616 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 JADE3Q92613 823 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 MOCOSQ96EN8 888 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 DDX50Q9BQ39 737 aaKnown RBP14.6□□□□□ -0.07
USP44-203ENST00000537435 GATA5Q9BWX5 397 aaPredicted RBP14.6□□□□□ -0.07
USP44-203ENST00000537435 TRHDEQ9UKU6 1024 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 POMPQ9Y244 141 aa14.6□□□□□ -0.07
USP44-203ENST00000537435 CCDC78A2IDD5 438 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 LYNP07948 512 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 NMBRP28336 390 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 PRDX6P30041 224 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 NPY2RP49146 381 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 GALNT2Q10471 571 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 LRRC36Q1X8D7 754 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 ARL13BQ3SXY8 428 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 INTS6LQ5JSJ4 861 aaKnown RBP14.59□□□□□ -0.07
USP44-203ENST00000537435 TCHHL1Q5QJ38 904 aaPredicted RBP14.59□□□□□ -0.07
USP44-203ENST00000537435 TWF2Q6IBS0 349 aaKnown RBP14.59□□□□□ -0.07
USP44-203ENST00000537435 FAM35AQ86V20 835 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 ZMIZ2Q8NF64 920 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 ZNF483Q8TF39 744 aaPredicted RBP14.59□□□□□ -0.07
USP44-203ENST00000537435 LENG1Q96BZ8 264 aaPredicted RBP14.59□□□□□ -0.07
USP44-203ENST00000537435 OR52B2Q96RD2 323 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 IL22Q9GZX6 179 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 CNGB3Q9NQW8 809 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 ACSS2Q9NR19 701 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 TMEM30AQ9NV96 361 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 SLC39A10Q9ULF5 831 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 ARHGAP26Q9UNA1 814 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 PDCD11Q14690 1871 aaKnown RBP14.59□□□□□ -0.07
USP44-203ENST00000537435 MAGEB16A2A368 324 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 MTSS1O43312 755 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 CHRNGP07510 517 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 ZCCHC18P0CG32 403 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 ADAM17P78536 824 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 GRM3Q14832 879 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 USP50Q70EL3 339 aaPredicted RBP14.59□□□□□ -0.07
USP44-203ENST00000537435 MS4A4AQ96JQ5 239 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 SENP8Q96LD8 212 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 COLEC11Q9BWP8 271 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 BRD8Q9H0E9 1235 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 PIDD1Q9HB75 910 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 TCF7L2Q9NQB0 619 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 ADAMTS6Q9UKP5 1117 aa14.59□□□□□ -0.07
USP44-203ENST00000537435 TIMM13Q9Y5L4 95 aaPredicted RBP14.59□□□□□ -0.07
USP44-203ENST00000537435 CCL15-CCL14A0A0B4J2E2 113 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 GOLGA8QA0A0J9YX86 632 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 MYBPHLA2RUH7 354 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 GOLGA8OA6NCC3 632 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 GOLGA8NF8WBI6 632 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 TK2O00142 265 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 JCHAINP01591 159 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 YBX3P16989 372 aaKnown RBP eCLIP14.58□□□□□ -0.07
USP44-203ENST00000537435 MPSTP25325 297 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 PPP2R5DQ14738 602 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 CCL15Q16663 113 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 METTL21CQ5VZV1 264 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 LPCAT4Q643R3 524 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 FBXW8Q8N3Y1 598 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.58□□□□□ -0.07
USP44-203ENST00000537435 ZC3H15Q8WU90 426 aaKnown RBP14.58□□□□□ -0.07
USP44-203ENST00000537435 EDEM1Q92611 657 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 PPP2R3CQ969Q6 453 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 PGAP3Q96FM1 320 aaPredicted RBP14.58□□□□□ -0.07
USP44-203ENST00000537435 PCED1BQ96HM7 432 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 CELF6Q96J87 481 aaKnown RBP14.58□□□□□ -0.07
USP44-203ENST00000537435 TEKT5Q96M29 485 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 LENG8Q96PV6 779 aaPredicted RBP14.58□□□□□ -0.07
USP44-203ENST00000537435 PPP1R10Q96QC0 940 aaKnown RBP14.58□□□□□ -0.07
USP44-203ENST00000537435 MCMBPQ9BTE3 642 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 ILKAPQ9H0C8 392 aaPredicted RBP14.58□□□□□ -0.07
USP44-203ENST00000537435 EBF3Q9H4W6 596 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 TASP1Q9H6P5 420 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 WDCPQ9H6R7 721 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 OXSMQ9NWU1 459 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 PDP2Q9P2J9 529 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 OR12D3Q9UGF7 316 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 TSC2P49815 1807 aa14.58□□□□□ -0.07
USP44-203ENST00000537435 SBF1O95248 1867 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 UNCXA6NJT0 531 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 H2AFYO75367 372 aaKnown RBP14.58□□□□□ -0.08
USP44-203ENST00000537435 FESP07332 822 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 SAT1P21673 171 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 GLDCP23378 1020 aa14.58□□□□□ -0.08
USP44-203ENST00000537435 EPHX2P34913 555 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms