RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 CD247P20963 164 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 ME2P23368 584 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 MGAT5BQ3V5L5 792 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 ZCCHC8Q6NZY4 707 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 ZBTB49Q6ZSB9 765 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 RALGPS2Q86X27 583 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 PDIK1LQ8N165 341 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 RDH13Q8NBN7 331 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 APBB2Q92870 758 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 VPS33AQ96AX1 596 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 C12orf42Q96LP6 360 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 TINF2Q9BSI4 451 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 ANKRD60Q9BZ19 345 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 TRIT1Q9H3H1 467 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 LRFN2Q9ULH4 789 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 GPSM3Q9Y4H4 160 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 GOLGA8SH3BPF8 625 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 CABYRO75952 493 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 DLGAP3O95886 979 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 IFNB1P01574 187 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 PGK2P07205 417 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 ENPP1P22413 925 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 SLC18A2Q05940 514 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 DNASE1L3Q13609 305 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 BBS9Q3SYG4 887 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 UGT3A1Q6NUS8 523 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 ARCQ7LC44 396 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 GALNT13Q8IUC8 556 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 PIWIL2Q8TC59 973 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 SLC20A1Q8WUM9 679 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 MAGED4Q96JG8 741 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 EBF4Q9BQW3 602 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 ZNF717Q9BY31 904 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 THG1LQ9NWX6 298 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 ZNF221Q9UK13 617 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 HOXC11O43248 304 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 SCO2O43819 266 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 TDP2O95551 362 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 EEF1B2P24534 225 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 SSTR1P30872 391 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 BFSP1Q12934 665 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 ART3Q13508 389 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 IKBKEQ14164 716 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 RHPN2Q8IUC4 686 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 FAM118BQ9BPY3 351 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 JMJD4Q9H9V9 463 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 MAGEE1Q9HCI5 957 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 WDR6Q9NNW5 1121 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 MAD2L2Q9UI95 211 aa11.07□□□□□ -0.64
CLSTN3-207ENST00000537408 ESYT2A0FGR8 921 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 POTEB3A0JP26 581 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 M0R2N6 131 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 CCNKO75909 580 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 CYP1A2P05177 515 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 PKLRP30613 574 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 FAM102BQ5T8I3 360 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 IQSEC1Q6DN90 963 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 POTEBQ6S5H4 581 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 SH3BP5LQ7L8J4 393 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 FAM178BQ8IXR5 827 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 CDRT15Q96T59 188 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 MTG1Q9BT17 334 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 TMEM39AQ9NV64 488 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 PHGDHO43175 533 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 CCL5P13501 91 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 CTRB1P17538 263 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 GLRA2P23416 452 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 KLRC2P26717 231 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 VAC14Q08AM6 782 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 GALNT1Q10472 559 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 PMS2P3Q13401 168 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 BFSP2Q13515 415 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 CTRB2Q6GPI1 263 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 CCDC60Q8IWA6 550 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 ABI1Q8IZP0 508 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 EPS8L1Q8TE68 723 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 DCAKDQ8WVC6 231 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 CNDP2Q96KP4 475 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 SYT11Q9BT88 431 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 TRIM39Q9HCM9 518 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 WARS2Q9UGM6 360 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 MYH11P35749 1972 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 GPC4O75487 556 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 PRLP01236 227 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 SNRPAP09012 282 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 CYP2J2P51589 502 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 MAPK10P53779 464 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 MAPK11Q15759 364 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 LDLRAP1Q5SW96 308 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 RINT1Q6NUQ1 792 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 FAM122CQ6P4D5 195 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 LBX2Q6XYB7 198 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 KCTD8Q6ZWB6 473 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 GALNT7Q86SF2 657 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 SLC22A16Q86VW1 577 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 TCAIMQ8N3R3 496 aa11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 PNPT1Q8TCS8 783 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-207ENST00000537408 DACH2Q96NX9 599 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms