RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 TMEM159Q96B96 161 aa9.81□□□□□ -0.84
CPSF7-217ENST00000537162 SMARCD1Q96GM5 515 aa9.81□□□□□ -0.84
CPSF7-217ENST00000537162 REEP2Q9BRK0 252 aa9.81□□□□□ -0.84
CPSF7-217ENST00000537162 DCLK3Q9C098 648 aa9.81□□□□□ -0.84
CPSF7-217ENST00000537162 B3GNT4Q9C0J1 378 aa9.81□□□□□ -0.84
CPSF7-217ENST00000537162 FBXO44Q9H4M3 255 aa9.81□□□□□ -0.84
CPSF7-217ENST00000537162 GSX1Q9H4S2 264 aaPredicted RBP9.81□□□□□ -0.84
CPSF7-217ENST00000537162 GPN2Q9H9Y4 310 aaPredicted RBP9.81□□□□□ -0.84
CPSF7-217ENST00000537162 CYP4F12Q9HCS2 524 aa9.81□□□□□ -0.84
CPSF7-217ENST00000537162 RYDENQ9NUL5 291 aaKnown RBP9.81□□□□□ -0.84
CPSF7-217ENST00000537162 MAP10Q9P2G4 905 aa9.81□□□□□ -0.84
CPSF7-217ENST00000537162 NAGPAQ9UK23 515 aa9.81□□□□□ -0.84
CPSF7-217ENST00000537162 ZFR2Q9UPR6 939 aaKnown RBP9.81□□□□□ -0.84
CPSF7-217ENST00000537162 ERVW-1Q9UQF0 538 aa9.81□□□□□ -0.84
CPSF7-217ENST00000537162 B3GALT1Q9Y5Z6 326 aa9.81□□□□□ -0.84
CPSF7-217ENST00000537162 A6NNZ2 444 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 H3BM21 787 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 RAD51BO15315 384 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 JAK2O60674 1132 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 FAM155BO75949 473 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 DNAJB5O75953 348 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 TMEM191BP0C7N4 346 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 HNRNPA2B1P22626 353 aaKnown RBP9.8□□□□□ -0.84
CPSF7-217ENST00000537162 AKT2P31751 481 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 STK19P49842 368 aaPredicted RBP9.8□□□□□ -0.84
CPSF7-217ENST00000537162 COG7P83436 770 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 GTF2BQ00403 316 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 PDAP1Q13442 181 aaKnown RBP9.8□□□□□ -0.84
CPSF7-217ENST00000537162 TCEA2Q15560 299 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 IL17AQ16552 155 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 PRRT3Q5FWE3 981 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 EFHC2Q5JST6 749 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 TMEM164Q5U3C3 297 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 SEL1L3Q68CR1 1132 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 SLFN12LQ6IEE8 588 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 PARGQ86W56 976 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 MYCT1Q8N699 235 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 IGSF22Q8N9C0 903 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 RCBTB1Q8NDN9 531 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 STARD8Q92502 1023 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 GLMNQ92990 594 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 ZNF274Q96GC6 653 aaPredicted RBP9.8□□□□□ -0.84
CPSF7-217ENST00000537162 RPL10LQ96L21 214 aaKnown RBP9.8□□□□□ -0.84
CPSF7-217ENST00000537162 LRRC61Q9BV99 259 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 CSNK1G1Q9HCP0 422 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 RBAKQ9NYW8 714 aaPredicted RBP9.8□□□□□ -0.84
CPSF7-217ENST00000537162 ITIH6Q6UXX5 1313 aa9.8□□□□□ -0.84
CPSF7-217ENST00000537162 KIAA1324LA8MWY0 1029 aaPredicted RBP9.79□□□□□ -0.84
CPSF7-217ENST00000537162 CAPN5O15484 640 aaPredicted RBP9.79□□□□□ -0.84
CPSF7-217ENST00000537162 SLC7A4O43246 635 aa9.79□□□□□ -0.84
CPSF7-217ENST00000537162 PRICKLE3O43900 615 aaPredicted RBP9.79□□□□□ -0.84
CPSF7-217ENST00000537162 CST3P01034 146 aaPredicted RBP9.79□□□□□ -0.84
CPSF7-217ENST00000537162 KCNA1Q09470 495 aa9.79□□□□□ -0.84
CPSF7-217ENST00000537162 ZRSR1Q15695 479 aaKnown RBP9.79□□□□□ -0.84
CPSF7-217ENST00000537162 ZRSR2Q15696 482 aaKnown RBP9.79□□□□□ -0.84
CPSF7-217ENST00000537162 ZRANB3Q5FWF4 1079 aa9.79□□□□□ -0.84
CPSF7-217ENST00000537162 CPLX2Q6PUV4 134 aaKnown RBP9.79□□□□□ -0.84
CPSF7-217ENST00000537162 CCNJLQ8IV13 435 aa9.79□□□□□ -0.84
CPSF7-217ENST00000537162 TMA16Q96EY4 203 aaKnown RBP9.79□□□□□ -0.84
CPSF7-217ENST00000537162 TAAR9Q96RI9 348 aa9.79□□□□□ -0.84
CPSF7-217ENST00000537162 CGRRF1Q99675 332 aa9.79□□□□□ -0.84
CPSF7-217ENST00000537162 TMUB1Q9BVT8 246 aa9.79□□□□□ -0.84
CPSF7-217ENST00000537162 SLC29A3Q9BZD2 475 aa9.79□□□□□ -0.84
CPSF7-217ENST00000537162 BRMS1Q9HCU9 246 aa9.79□□□□□ -0.84
CPSF7-217ENST00000537162 INTS13Q9NVM9 706 aa9.79□□□□□ -0.84
CPSF7-217ENST00000537162 NAALADL1Q9UQQ1 740 aa9.79□□□□□ -0.84
CPSF7-217ENST00000537162 KIF3AQ9Y496 699 aa9.79□□□□□ -0.84
CPSF7-217ENST00000537162 KCTD3Q9Y597 815 aa9.79□□□□□ -0.84
CPSF7-217ENST00000537162 PCDHB13Q9Y5F0 798 aa9.79□□□□□ -0.84
CPSF7-217ENST00000537162 ARHGEF17Q96PE2 2063 aaPredicted RBP9.79□□□□□ -0.84
CPSF7-217ENST00000537162 ATP8B3O60423 1300 aa9.79□□□□□ -0.84
CPSF7-217ENST00000537162 GOLGA6L7A0A1B0GV03 622 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 HEATR9A2RTY3 570 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 LMO7DNF2Z398 122 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 RNF103O00237 685 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 ZG16O60844 167 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 TBL1XO60907 577 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 RFPL1O75677 317 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 CD2BP2O95400 341 aaKnown RBP9.78□□□□□ -0.84
CPSF7-217ENST00000537162 ANXA6P08133 673 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 TSHRP16473 764 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 TCN2P20062 427 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 F8A1P23610 371 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 PDE1CQ14123 709 aaPredicted RBP9.78□□□□□ -0.84
CPSF7-217ENST00000537162 FSCBQ5H9T9 825 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 PIP5KL1Q5T9C9 394 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 ESRP1Q6NXG1 681 aaKnown RBP9.78□□□□□ -0.84
CPSF7-217ENST00000537162 RFWD3Q6PCD5 774 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 LINGO4Q6UY18 593 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 HORMAD1Q86X24 394 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 SFTPA2Q8IWL1 248 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 ZNF295-AS1Q8N0V1 137 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 ARL10Q8N8L6 244 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 SLC2A14Q8TDB8 520 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 ART4Q93070 314 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 ELMO3Q96BJ8 720 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 MYEOVQ96EZ4 313 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 TRIM55Q9BYV6 548 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 TRIM8Q9BZR9 551 aa9.78□□□□□ -0.84
CPSF7-217ENST00000537162 RUBCNLQ9H714 662 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms