RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 SEPT1Q8WYJ6 367 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 SNX19Q92543 992 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 MROQ9BYG7 248 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 ACP6Q9NPH0 428 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 OLA1Q9NTK5 396 aaKnown RBP5.49□□□□□ -1.53
PTPRD-213ENST00000537002 EHD3Q9NZN3 535 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 MINPP1Q9UNW1 487 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 AKT3Q9Y243 479 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 PLLPQ9Y342 182 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 NR2E1Q9Y466 385 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 PCDHA2Q9Y5H9 948 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 TNS2Q63HR2 1409 aa5.49□□□□□ -1.53
PTPRD-213ENST00000537002 CLRN2A0PK11 232 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 TNFRSF10AO00220 468 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CLPXO76031 633 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CYP1A1P04798 512 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 GNG2P59768 71 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 PSMC6P62333 389 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CHRNB3Q05901 458 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 DCAF15Q66K64 600 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CCDC149Q6ZUS6 474 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 ACTL9Q8TC94 416 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 RORBQ92753 470 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 ZNF641Q96N77 438 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 DOK1Q99704 481 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CCDC106Q9BWC9 280 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 OR2B2Q9GZK3 357 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 SP140LQ9H930 580 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 LRRC4CQ9HCJ2 640 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CASS4Q9NQ75 786 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 GPRC5DQ9NZD1 345 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 TCRBV7S2A1N4TA0A589 114 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 KATNA1O75449 491 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 GPD1P21695 349 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 DNAJB1P25685 340 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 TUFMP49411 452 aaKnown RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 SIX1Q15475 284 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CCNJQ5T5M9 372 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 BROXQ5VW32 411 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 PLA2G4FQ68DD2 849 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 SWSAP1Q6NVH7 229 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 DUS1LQ6P1R4 473 aaKnown RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 UBA3Q8TBC4 463 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 OSCP1Q8WVF1 389 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 PSPC1Q8WXF1 523 aaKnown RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 RCN3Q96D15 328 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 RNF145Q96MT1 663 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 LIN28AQ9H9Z2 209 aaKnown RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 PMF1-BGLAPU3KQ54 211 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 C5P01031 1676 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 TRIM64CA6NLI5 447 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 HS6ST1O60243 411 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 MED26O95402 600 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 PCNAP12004 261 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 ETV4P43268 484 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 TGFBIQ15582 683 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CBWD6Q4V339 395 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 SFT2D3Q587I9 215 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CBWD3Q5JTY5 395 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CBWD5Q5RIA9 395 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 TAF2Q6P1X5 1199 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 ABRAXAS1Q6UWZ7 409 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 PKD1L3Q7Z443 1732 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 SLCO6A1Q86UG4 719 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CYP4X1Q8N118 509 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 TTC9Q92623 222 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 ULK4Q96C45 1275 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 ISOC1Q96CN7 298 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 EGFL8Q99944 293 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 RIBC2Q9H4K1 309 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CXorf21Q9HAI6 301 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 MAN1C1Q9NR34 630 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 NPAP1Q9NZP6 1156 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 HACL1Q9UJ83 578 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 H3BNH8 94 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 TPP1O14773 563 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 INPP4BO15327 924 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CAPNS1P04632 268 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 FASTKQ14296 549 aaKnown RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 ZNF280DQ6N043 979 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 LLGL2Q6P1M3 1020 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 NEK5Q6P3R8 708 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 STRA8Q7Z7C7 330 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CHERPQ8IWX8 916 aaKnown RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 OR7A2PQ8NGA2 310 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 ZNF597Q96LX8 424 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 PNPOQ9NVS9 261 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 PSME2Q9UL46 239 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 LAMB1P07942 1786 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 SUPT7LO94864 414 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 C1QBPQ07021 282 aaKnown RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 TOP3AQ13472 1001 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 RNASEH2BQ5TBB1 312 aaKnown RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 PTF1AQ7RTS3 328 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 CENPLQ8N0S6 344 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-213ENST00000537002 LSMEM2Q8N112 164 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 TAS1R2Q8TE23 839 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 FIG4Q92562 907 aa5.48□□□□□ -1.53
PTPRD-213ENST00000537002 ZNF518BQ9C0D4 1074 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms