RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 STN1Q9H668 368 aaKnown RBP13.84□□□□□ -0.19
SMG6-203ENST00000536871 NPHS2Q9NP85 383 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 ARHGEF3Q9NR81 526 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 KCNK4Q9NYG8 393 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 PRG3Q9Y2Y8 225 aaPredicted RBP13.84□□□□□ -0.19
SMG6-203ENST00000536871 NR2E3Q9Y5X4 410 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 MGRN1O60291 552 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 MAFKO60675 156 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 FKTNO75072 461 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 TRPA1O75762 1119 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 AMHP03971 560 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 APOA4P06727 396 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 NQO1P15559 274 aaKnown RBP13.84□□□□□ -0.19
SMG6-203ENST00000536871 PAMP19021 973 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 BGNP21810 368 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 GRK2P25098 689 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 TYK2P29597 1187 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 MAGEA12P43365 314 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 RENBPP51606 427 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 MPP3Q13368 585 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 FAM171A1Q5VUB5 890 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 FBXW10Q5XX13 1052 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 FAM91A1Q658Y4 838 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 CRLF3Q8IUI8 442 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 NPAS4Q8IUM7 802 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 PARP9Q8IXQ6 854 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 ARMC2Q8NEN0 867 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 TBL1YQ9BQ87 522 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 GORASP1Q9BQQ3 440 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 NMUR1Q9HB89 426 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 VPS45Q9NRW7 570 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 THAP1Q9NVV9 213 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 SFMBT1Q9UHJ3 866 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 ZFP69BQ9UJL9 534 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 CHKBQ9Y259 395 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 HS3ST4Q9Y661 456 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 PTPRDP23468 1912 aa13.84□□□□□ -0.19
SMG6-203ENST00000536871 ZCWPW2A0A1B0GU75 182 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 CARNS1A5YM72 827 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 UGT1A9O60656 530 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 TNK2Q07912 1038 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 SNCBQ16143 134 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 PREPLQ4J6C6 727 aaPredicted RBP13.83□□□□□ -0.2
SMG6-203ENST00000536871 ASRGL1Q7L266 308 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 TP53INP2Q8IXH6 220 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 FAM126BQ8IXS8 530 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 FBXO32Q969P5 355 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 CELF6Q96J87 481 aaKnown RBP13.83□□□□□ -0.2
SMG6-203ENST00000536871 CASD1Q96PB1 797 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 SLC39A8Q9C0K1 460 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 LRMDAQ9H2I8 198 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 UGT1A7Q9HAW7 530 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 UGT1A10Q9HAW8 530 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 UGT1A8Q9HAW9 530 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 TMEM248Q9NWD8 314 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 RPL26L1Q9UNX3 145 aaKnown RBP13.83□□□□□ -0.2
SMG6-203ENST00000536871 NLRC5Q86WI3 1866 aa13.83□□□□□ -0.2
SMG6-203ENST00000536871 IGLV3-10A0A075B6K4 115 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 TRAFD1O14545 582 aaPredicted RBP13.82□□□□□ -0.2
SMG6-203ENST00000536871 TPP1O14773 563 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 B4GALT3O60512 393 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 H2AFYO75367 372 aaKnown RBP13.82□□□□□ -0.2
SMG6-203ENST00000536871 ALDOAP04075 364 aaKnown RBP13.82□□□□□ -0.2
SMG6-203ENST00000536871 OR4Q2P0C623 313 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 CPB1P15086 417 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 ELF1P32519 619 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 PRKAA2P54646 552 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 CRADDP78560 199 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 WLSQ5T9L3 541 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 TEDDM1Q5T9Z0 273 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 FUT10Q6P4F1 479 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 PKN3Q6P5Z2 889 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 CDHR3Q6ZTQ4 885 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 KCNMB4Q86W47 210 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 CNTD1Q8N815 330 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 PPHLN1Q8NEY8 458 aaKnown RBP13.82□□□□□ -0.2
SMG6-203ENST00000536871 DBF4BQ8NFT6 615 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 PPP1R14CQ8TAE6 165 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 OVCA2Q8WZ82 227 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 WWP1Q9H0M0 922 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 MYLK2Q9H1R3 596 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.82□□□□□ -0.2
SMG6-203ENST00000536871 DNAJB4Q9UDY4 337 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 MCM8Q9UJA3 840 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 ANKRD6Q9Y2G4 727 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 SNX10Q9Y5X0 201 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 F5H423 210 aaPredicted RBP13.82□□□□□ -0.2
SMG6-203ENST00000536871 F8W810 466 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 SNNO75324 88 aaPredicted RBP13.82□□□□□ -0.2
SMG6-203ENST00000536871 DLDP09622 509 aaKnown RBP13.82□□□□□ -0.2
SMG6-203ENST00000536871 SLC8A1P32418 973 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 YBEYP58557 167 aaPredicted RBP13.82□□□□□ -0.2
SMG6-203ENST00000536871 IRX1P78414 480 aaPredicted RBP13.82□□□□□ -0.2
SMG6-203ENST00000536871 ELF3P78545 371 aaPredicted RBP13.82□□□□□ -0.2
SMG6-203ENST00000536871 SF3A3Q12874 501 aaKnown RBP eCLIP13.82□□□□□ -0.2
SMG6-203ENST00000536871 STX3Q13277 289 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 LAMB3Q13751 1172 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 CHI3L2Q15782 390 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 TBCCQ15814 346 aa13.82□□□□□ -0.2
SMG6-203ENST00000536871 C11orf91Q3C1V1 193 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms