RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 NEU3Q9UQ49 428 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 ACTL7AQ9Y615 435 aa14.63□□□□□ -0.07
UBE3B-206ENST00000536398 FAM47DPA6NHR8 397 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 RNF103O00237 685 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 BNIP3LO60238 219 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 RNASEH1O60930 286 aaKnown RBP14.62□□□□□ -0.07
UBE3B-206ENST00000536398 LRIG2O94898 1065 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 IL1BP01584 269 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 SRCP12931 536 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 HOXD12P35452 270 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 ACVRL1P37023 503 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 DPP6P42658 865 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 VASPP50552 380 aaPredicted RBP14.62□□□□□ -0.07
UBE3B-206ENST00000536398 NRG1Q02297 640 aaPredicted RBP14.62□□□□□ -0.07
UBE3B-206ENST00000536398 ZNF252P-AS1Q0IIN9 211 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 UAP1L1Q3KQV9 507 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 POM121L1PQ3SYA9 428 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 TTC31Q49AM3 519 aaPredicted RBP14.62□□□□□ -0.07
UBE3B-206ENST00000536398 WDR45BQ5MNZ6 344 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 C6orf118Q5T5N4 469 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 ACBD5Q5T8D3 534 aaPredicted RBP14.62□□□□□ -0.07
UBE3B-206ENST00000536398 PLEKHA7Q6IQ23 1121 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 NLRP14Q86W24 1093 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 ZCCHC9Q8N567 271 aaKnown RBP14.62□□□□□ -0.07
UBE3B-206ENST00000536398 ARFGAP1Q8N6T3 406 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 CEP76Q8TAP6 659 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 VCPIP1Q96JH7 1222 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 CNPY3Q9BT09 278 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 GTPBP2Q9BX10 602 aaKnown RBP14.62□□□□□ -0.07
UBE3B-206ENST00000536398 XPO4Q9C0E2 1151 aaKnown RBP14.62□□□□□ -0.07
UBE3B-206ENST00000536398 DNAI1Q9UI46 699 aa14.62□□□□□ -0.07
UBE3B-206ENST00000536398 A0A1W2PQJ5 194 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 ILVBLA1L0T0 632 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 CBX4O00257 560 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 RTN2O75298 545 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 RNASEH2AO75792 299 aaKnown RBP14.61□□□□□ -0.07
UBE3B-206ENST00000536398 ZMPSTE24O75844 475 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 FSBPO95073 299 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 GZMAP12544 262 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 KCNA4P22459 653 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 KRT83P78385 493 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 GNA12Q03113 381 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 SCAPQ12770 1279 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 ELAVL3Q14576 367 aaKnown RBP14.61□□□□□ -0.07
UBE3B-206ENST00000536398 PPM1JQ5JR12 505 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 USP30Q70CQ3 517 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 TMC6Q7Z403 805 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 SLFN11Q7Z7L1 901 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 HDDC3Q8N4P3 179 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 DCAF4L2Q8NA75 395 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 ATP11CQ8NB49 1132 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 C1orf216Q8TAB5 229 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 SNX19Q92543 992 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 NTAN1Q96AB6 310 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 BIRC7Q96CA5 298 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 C2orf49Q9BVC5 232 aaPredicted RBP14.61□□□□□ -0.07
UBE3B-206ENST00000536398 SGK2Q9HBY8 427 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 ATP13A1Q9HD20 1204 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 PARVAQ9NVD7 372 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 GPATCH2LQ9NWQ4 482 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 ADAMTS1Q9UHI8 967 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 FZD10Q9ULW2 581 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 CAPN11Q9UMQ6 739 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 HS3ST2Q9Y278 367 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 NCKAP1Q9Y2A7 1128 aa14.61□□□□□ -0.07
UBE3B-206ENST00000536398 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.61□□□□□ -0.07
UBE3B-206ENST00000536398 PI4KAP42356 2102 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 TMEM191CA6NGB0 347 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 ARHGAP33O14559 1287 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 ZNF821O75541 412 aaPredicted RBP14.6□□□□□ -0.07
UBE3B-206ENST00000536398 CD160O95971 181 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 GYPCP04921 128 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 IGHV4-34P06331 123 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 CTSLP07711 333 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 RHOQP17081 205 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 GOT1P17174 413 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 PSMA2P25787 234 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 DRD3P35462 400 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 GALCP54803 685 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 ARF5P84085 180 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 ZBED6P86452 979 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 BNC1Q01954 994 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 GFPT1Q06210 699 aaPredicted RBP14.6□□□□□ -0.07
UBE3B-206ENST00000536398 TDRD12Q587J7 1177 aaKnown RBP14.6□□□□□ -0.07
UBE3B-206ENST00000536398 NCEH1Q6PIU2 408 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 LEKR1Q6ZMV7 388 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 CHST14Q8NCH0 376 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 RNF214Q8ND24 703 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 OR2A12Q8NGT7 310 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 ZNF653Q96CK0 615 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 TBC1D31Q96DN5 1066 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 OMDQ99983 421 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 ORAI3Q9BRQ5 295 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.6□□□□□ -0.07
UBE3B-206ENST00000536398 TNKS2Q9H2K2 1166 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 TSPY26PQ9H489 355 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 EBF2Q9HAK2 575 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 MYO1AQ9UBC5 1043 aa14.6□□□□□ -0.07
UBE3B-206ENST00000536398 CNOT8Q9UFF9 292 aaKnown RBP14.6□□□□□ -0.07
UBE3B-206ENST00000536398 PPM1HQ9ULR3 514 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms