RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 SPOPO43791 374 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 LRP3O75074 770 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 ZNF217O75362 1048 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 RARAP10276 462 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 HLA-EP13747 358 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 TCF4P15884 667 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 NNMTP40261 264 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 SPEM2Q0P670 501 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 CAMK2GQ13555 558 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-205ENST00000536255 KRT81Q14533 505 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 CA9Q16790 459 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 ZFYVE27Q5T4F4 411 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 PMS2CLQ68D20 193 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 KIAA1324Q6UXG2 1013 aaKnown RBP13.87□□□□□ -0.19
RPAIN-205ENST00000536255 RFX8Q6ZV50 586 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 POLNQ7Z5Q5 900 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 NLRP14Q86W24 1093 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 FRMD1Q8N878 549 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 RTL3Q8N8U3 475 aaKnown RBP13.87□□□□□ -0.19
RPAIN-205ENST00000536255 KDM1BQ8NB78 822 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 KCTD15Q96SI1 283 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-205ENST00000536255 DESI2Q9BSY9 194 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 C2orf49Q9BVC5 232 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-205ENST00000536255 MAGEB5Q9BZ81 275 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 MKRN2Q9H000 416 aaKnown RBP13.87□□□□□ -0.19
RPAIN-205ENST00000536255 PRDM16Q9HAZ2 1276 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 PARD6AQ9NPB6 346 aa13.87□□□□□ -0.19
RPAIN-205ENST00000536255 RCOR3Q9P2K3 495 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-205ENST00000536255 RCCD1A6NED2 376 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 WASH4PA8MWX3 477 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 MAP3K13O43283 966 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 RAMP2O60895 175 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 SRPRAP08240 638 aaKnown RBP13.86□□□□□ -0.19
RPAIN-205ENST00000536255 TGM1P22735 817 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 MZF1P28698 734 aaPredicted RBP13.86□□□□□ -0.19
RPAIN-205ENST00000536255 GJC1P36383 396 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 COPAP53621 1224 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 CDH6P55285 790 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 ECT2LQ008S8 904 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 GNA12Q03113 381 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 PDK2Q15119 407 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 ODF2Q5BJF6 829 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 ARTNQ5T4W7 220 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 LRRC38Q5VT99 294 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 C11orf63Q6NUN7 778 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 DAAM2Q86T65 1068 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 APCDD1Q8J025 514 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 ZNF366Q8N895 744 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 DCAF4L2Q8NA75 395 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 KCTD6Q8NC69 237 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 MYO19Q96H55 970 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 MRGPRX3Q96LB0 322 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 MAGEH1Q9H213 219 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 ARRDC1-AS1Q9H2J1 176 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 ZNF212Q9UDV6 495 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 DNAI1Q9UI46 699 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 MBD1Q9UIS9 605 aaPredicted RBP13.86□□□□□ -0.19
RPAIN-205ENST00000536255 SLC25A13Q9UJS0 675 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 CYP8B1Q9UNU6 501 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 TFR2Q9UP52 801 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 NEU3Q9UQ49 428 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 PCDHGA5Q9Y5G8 931 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 ADGRG1Q9Y653 693 aa13.86□□□□□ -0.19
RPAIN-205ENST00000536255 IGHV1OR15-9A0A0B4J2B8 117 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 BUB1O43683 1085 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 KRT86O43790 486 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 BUB1BO60566 1050 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-205ENST00000536255 CCDC175P0C221 793 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 GOT1P17174 413 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 COMTP21964 271 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 CTSOP43234 321 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-205ENST00000536255 YBEYP58557 167 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-205ENST00000536255 CCZ1BP86790 482 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 CCZ1P86791 482 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-205ENST00000536255 POLD3Q15054 466 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-205ENST00000536255 CSRP2Q16527 193 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 SLC36A4Q6YBV0 504 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 LPCAT2Q7L5N7 544 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 METTL3Q86U44 580 aaKnown RBP13.85□□□□□ -0.19
RPAIN-205ENST00000536255 TMPRSS6Q8IU80 811 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 RHOT1Q8IXI2 618 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 LZTR1Q8N653 840 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 OR52K2Q8NGK3 314 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 OR2T3Q8NH03 318 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 TPCN2Q8NHX9 752 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 PRCCQ92733 491 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-205ENST00000536255 ALG14Q96F25 216 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 SIPA1Q96FS4 1042 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 PDLIM2Q96JY6 352 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 LACRTQ9GZZ8 138 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 FBRSQ9HAH7 460 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 ATP13A1Q9HD20 1204 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 PRSS16Q9NQE7 514 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 SEMA4GQ9NTN9 838 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 DDX56Q9NY93 547 aaKnown RBP13.85□□□□□ -0.19
RPAIN-205ENST00000536255 CWC15Q9P013 229 aaKnown RBP13.85□□□□□ -0.19
RPAIN-205ENST00000536255 SUN2Q9UH99 717 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 HPCAL4Q9UM19 191 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 ERVW-1Q9UQF0 538 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms