RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 GCNAQ96QF7 691 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 MMS19Q96T76 1030 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 MXRA8Q9BRK3 442 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 EIF2AQ9BY44 585 aaKnown RBP4.28□□□□□ -1.72
YBX3-205ENST00000536107 SLC6A15Q9H2J7 730 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 AGO4Q9HCK5 861 aaKnown RBP4.28□□□□□ -1.72
YBX3-205ENST00000536107 THSD1Q9NS62 852 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 CALCOCO1Q9P1Z2 691 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 TESQ9UGI8 421 aaKnown RBP4.28□□□□□ -1.72
YBX3-205ENST00000536107 ANAPC4Q9UJX5 808 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 WNT6Q9Y6F9 365 aa4.28□□□□□ -1.72
YBX3-205ENST00000536107 THADAQ6YHU6 1953 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 F8P00451 2351 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 ATG2BQ96BY7 2078 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 A0A1B0GVT2 93 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 I3L4J1 428 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 SGK1O00141 431 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 KCNK3O14649 394 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 BCAT2O15382 392 aaPredicted RBP4.27□□□□□ -1.73
YBX3-205ENST00000536107 TRAPPC3O43617 180 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 DLX3O60479 287 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 ZNF217O75362 1048 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 B3GAT3O94766 335 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 ERLIN2O94905 339 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 MPIG6BO95866 241 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 SRGAP2CP0DJJ0 459 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 HNRNPLP14866 589 aaKnown RBP eCLIP4.27□□□□□ -1.73
YBX3-205ENST00000536107 GABRR2P28476 465 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 TKTP29401 623 aaKnown RBP4.27□□□□□ -1.73
YBX3-205ENST00000536107 MC4RP32245 332 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 AVPR1AP37288 418 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 CASRP41180 1078 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 ALDH1A3P47895 512 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 IFNAR2P48551 515 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 CCT8P50990 548 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 ERVPABLB-1P60509 514 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 ATP2C1P98194 919 aaPredicted RBP4.27□□□□□ -1.73
YBX3-205ENST00000536107 PLD1Q13393 1074 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 TAF12Q16514 161 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 ARL13BQ3SXY8 428 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 MTERF2Q49AM1 385 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 TIGD2Q4W5G0 525 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 MAMDC2Q7Z304 686 aaPredicted RBP4.27□□□□□ -1.73
YBX3-205ENST00000536107 HOMEZQ8IX15 550 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 LINC01465Q8N7H1 131 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.27□□□□□ -1.73
YBX3-205ENST00000536107 ERLEC1Q96DZ1 483 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 MTMR8Q96EF0 704 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 SGF29Q96ES7 293 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 ZNF419Q96HQ0 510 aaPredicted RBP4.27□□□□□ -1.73
YBX3-205ENST00000536107 MTMR9Q96QG7 549 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 CCNL2Q96S94 520 aaPredicted RBP4.27□□□□□ -1.73
YBX3-205ENST00000536107 GPHA2Q96T91 129 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 SEMA3CQ99985 751 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 RNF41Q9H4P4 317 aaPredicted RBP4.27□□□□□ -1.73
YBX3-205ENST00000536107 TASP1Q9H6P5 420 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 ECT2Q9H8V3 914 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 PSTPIP2Q9H939 334 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 ZDHHC4Q9NPG8 344 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 DUS2Q9NX74 493 aaKnown RBP4.27□□□□□ -1.73
YBX3-205ENST00000536107 NUP205Q92621 2012 aa4.27□□□□□ -1.73
YBX3-205ENST00000536107 SPTBN1Q01082 2364 aaKnown RBP4.27□□□□□ -1.73
YBX3-205ENST00000536107 SPENQ96T58 3664 aaKnown RBP4.27□□□□□ -1.73
YBX3-205ENST00000536107 DOCK6Q96HP0 2047 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 CACNA1DQ01668 2161 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 PTPRBP23467 1997 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 IGHV1OR15-9A0A0B4J2B8 117 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 ANTXRLA6NF34 631 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 H7C4K7 107 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 K7EQS6 105 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 CBX4O00257 560 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 LAD1O00515 517 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 MEIS2O14770 477 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 MARCH6O60337 910 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 USP12O75317 370 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 VPS4BO75351 444 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 ABLIM3O94929 683 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 FGF19O95750 216 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 MT-CO3P00414 261 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 FGRP09769 529 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 TRIM27P14373 513 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 TYRP1P17643 537 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 HOXA11P31270 313 aaPredicted RBP4.26□□□□□ -1.73
YBX3-205ENST00000536107 CSNK1EP49674 416 aaKnown RBP4.26□□□□□ -1.73
YBX3-205ENST00000536107 ELLP55199 621 aaPredicted RBP4.26□□□□□ -1.73
YBX3-205ENST00000536107 GPR85P60893 370 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 FOXF2Q12947 444 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 UBE2SQ16763 222 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 KIF19Q2TAC6 998 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 CTXN3Q4LDR2 81 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 CCDC184Q52MB2 194 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 PRR16Q569H4 304 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 IFIT1BQ5T764 474 aaKnown RBP4.26□□□□□ -1.73
YBX3-205ENST00000536107 TPGS2Q68CL5 300 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 NOTUMQ6P988 496 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 TMEM57Q8N5G2 664 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 FAM98AQ8NCA5 519 aaKnown RBP4.26□□□□□ -1.73
YBX3-205ENST00000536107 SNX19Q92543 992 aa4.26□□□□□ -1.73
YBX3-205ENST00000536107 ATP2A3Q93084 1043 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms