RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 AMHP03971 560 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 YBX3P16989 372 aaKnown RBP eCLIP16.34■□□□□ 0.214e-9■■□□□ 13.1
CHMP1A-202ENST00000535997 NFKB1P19838 968 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 TUBP50607 506 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 CDH17Q12864 832 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 ZBTB17Q13105 803 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 PRPSAP1Q14558 356 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 C9orf131Q5VYM1 1079 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 OR52E8Q6IFG1 317 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 NAPEPLDQ6IQ20 393 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 LINC00523Q86TU6 105 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 TLK2Q86UE8 772 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 FAM35AQ86V20 835 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 LCA5Q86VQ0 697 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 SLC25A41Q8N5S1 370 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 ZMIZ2Q8NF64 920 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 ZSCAN18Q8TBC5 510 aaPredicted RBP16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 RDH11Q8TC12 318 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 VPS39Q96JC1 886 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 CAB39LQ9H9S4 337 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 ARHGAP26Q9UNA1 814 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 ANKRD6Q9Y2G4 727 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 PTCH2Q9Y6C5 1203 aa16.34■□□□□ 0.21
CHMP1A-202ENST00000535997 IGFBP6P24592 240 aaPredicted RBP16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 CSRP3P50461 194 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 DLG2Q15700 870 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 IZUMO2Q6UXV1 221 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 PHTF2Q8N3S3 785 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 DPF3Q92784 378 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 KIFC1Q9BW19 673 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 TLK1Q9UKI8 766 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 UPP2O95045 317 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 JCHAINP01591 159 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 COX4I1P13073 169 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 NUMBP49757 651 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 ERFP50548 548 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 HK2P52789 917 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 PRKAA2P54646 552 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 IRF9Q00978 393 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 ANO4Q32M45 955 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 PM20D1Q6GTS8 502 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 DCLRE1AQ6PJP8 1040 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 FRMD7Q6ZUT3 714 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 GPRIN1Q7Z2K8 1008 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 DEFB107AQ8IZN7 70 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 FBXW8Q8N3Y1 598 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 RTKNQ9BST9 563 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 GATA5Q9BWX5 397 aaPredicted RBP16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 TKTL2Q9H0I9 626 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 IARS2Q9NSE4 1012 aaKnown RBP16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 CDH9Q9ULB4 789 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 ASB3Q9Y575 518 aa16.33■□□□□ 0.2
CHMP1A-202ENST00000535997 BUD23O43709 281 aaKnown RBP16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 CACNG3O60359 315 aa16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 LRIG2O94898 1065 aa16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 GNAT1P11488 350 aa16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 TPH1P17752 444 aa16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 ITGAXP20702 1163 aa16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 DNAJB1P25685 340 aa16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 CPT1AP50416 773 aa16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 EPHB1P54762 984 aa16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 ASPHQ12797 758 aa16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 KLHDC8BQ8IXV7 354 aa16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 TDRD5Q8NAT2 981 aaKnown RBP16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 PARK7Q99497 189 aaKnown RBP16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 GPR22Q99680 433 aa16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 OXCT2Q9BYC2 517 aaPredicted RBP16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 YIPF3Q9GZM5 350 aa16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 TCF7L2Q9NQB0 619 aa16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 MAN1C1Q9NR34 630 aa16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 POMPQ9Y244 141 aa16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 AAR2Q9Y312 384 aaKnown RBP16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 ZNF236Q9UL36 1845 aa16.32■□□□□ 0.2
CHMP1A-202ENST00000535997 C17orf102A2RUQ5 167 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 HHLA1C9JL84 531 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 MATN2O00339 956 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 ZBTB14O43829 449 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 GLDCP23378 1020 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 CCNHP51946 323 aaPredicted RBP16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 RABGGTBP53611 331 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 CACNA2D1P54289 1103 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 COG7P83436 770 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 KLF10Q13118 480 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 HNRNPDQ14103 355 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 SLC9B1Q4ZJI4 515 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 OLFML2BQ68BL8 750 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 DHDDSQ86SQ9 333 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 TMEM151AQ8N4L1 468 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 SLC26A7Q8TE54 656 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 PYDC1Q8WXC3 89 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 IRGQQ8WZA9 623 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 SMARCD1Q96GM5 515 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 APOL2Q9BQE5 337 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 ACE2Q9BYF1 805 aaPredicted RBP16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 SHCBP1LQ9BZQ2 653 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 DRC3Q9H069 523 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 VCX3BQ9H321 246 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 RHOJQ9H4E5 214 aa16.31■□□□□ 0.2
CHMP1A-202ENST00000535997 TMEM30AQ9NV96 361 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms