RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 TBATAQ96M53 351 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 TRAPPC9Q96Q05 1148 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 PRR25Q96S07 402 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 PIGSQ96S52 555 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 PYM1Q9BRP8 204 aaKnown RBP3.66□□□□□ -1.82
SNHG1-202ENST00000535689 DDX23Q9BUQ8 820 aaKnown RBP3.66□□□□□ -1.82
SNHG1-202ENST00000535689 SEMA4CQ9C0C4 833 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 MAGEH1Q9H213 219 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 PNNQ9H307 717 aaKnown RBP3.66□□□□□ -1.82
SNHG1-202ENST00000535689 CCDC134Q9H6E4 229 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 SFXN1Q9H9B4 322 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 CPNE5Q9HCH3 593 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 ZCCHC17Q9NP64 241 aaKnown RBP3.66□□□□□ -1.82
SNHG1-202ENST00000535689 MYOZ2Q9NPC6 264 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 GGA3Q9NZ52 723 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 FOXJ2Q9P0K8 574 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 ZNHIT2Q9UHR6 403 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 IPO11Q9UI26 975 aaKnown RBP3.66□□□□□ -1.82
SNHG1-202ENST00000535689 ANAPC4Q9UJX5 808 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 SLC13A4Q9UKG4 626 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 NUDCQ9Y266 331 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 DGKBQ9Y6T7 804 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 MRC1P22897 1456 aa3.66□□□□□ -1.82
SNHG1-202ENST00000535689 A0A087WZ62 844 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 HMX3A6NHT5 357 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 LINC00473A8K010 186 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 CTIFO43310 598 aaKnown RBP3.65□□□□□ -1.83
SNHG1-202ENST00000535689 DNPH1O43598 174 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 ECE2O60344 883 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 SGPL1O95470 568 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 HNRNPCP07910 306 aaKnown RBP eCLIP3.65□□□□□ -1.83
SNHG1-202ENST00000535689 HMOX1P09601 288 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 TACR3P29371 465 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 SERPINA4P29622 427 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 NTSR1P30989 418 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 SLC8A1P32418 973 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 ACTR2P61160 394 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 SIM1P81133 766 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-202ENST00000535689 FOXI1Q12951 378 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 HLFQ16534 295 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 LRIT3Q3SXY7 679 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 FBXO47Q5MNV8 452 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 CC2D1BQ5T0F9 858 aaKnown RBP3.65□□□□□ -1.83
SNHG1-202ENST00000535689 SUSD4Q5VX71 490 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 CERS3Q8IU89 383 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 VRK3Q8IV63 474 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 ZNF34Q8IZ26 560 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 BEND2Q8NDZ0 799 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 CD99L2Q8TCZ2 262 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 GOLGA1Q92805 767 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 KAT2BQ92831 832 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 USP13Q92995 863 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-202ENST00000535689 SARAFQ96BY9 339 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 CTHRC1Q96CG8 243 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 CHMP4AQ9BY43 222 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 CIPCQ9C0C6 399 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 PABPC3Q9H361 631 aaKnown RBP3.65□□□□□ -1.83
SNHG1-202ENST00000535689 CDCP1Q9H5V8 836 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 PRDM8Q9NQV8 689 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 RASSF1Q9NS23 344 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 ARL8BQ9NVJ2 186 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 FZD4Q9ULV1 537 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 RRP7AQ9Y3A4 280 aaKnown RBP3.65□□□□□ -1.83
SNHG1-202ENST00000535689 SIRT4Q9Y6E7 314 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-202ENST00000535689 PSME4Q14997 1843 aa3.65□□□□□ -1.83
SNHG1-202ENST00000535689 SIPA1L3O60292 1781 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-202ENST00000535689 SNED1Q8TER0 1413 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 GXYLT2A0PJZ3 443 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 YDJCA8MPS7 323 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 TARM1B6A8C7 271 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 NKX2-8O15522 239 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 EXOC3O60645 756 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 GUCY1B2O75343 617 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 FSHBP01225 129 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 HLA-DQA2P01906 255 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 LMNAP02545 664 aaKnown RBP3.64□□□□□ -1.83
SNHG1-202ENST00000535689 ENO1P06733 434 aaKnown RBP3.64□□□□□ -1.83
SNHG1-202ENST00000535689 PDHA1P08559 390 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 CERS1P27544 350 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 CTGFP29279 349 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 HTR7P34969 479 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 DDIT3P35638 169 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 PBX1P40424 430 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 COPB1P53618 953 aaKnown RBP3.64□□□□□ -1.83
SNHG1-202ENST00000535689 RPS8P62241 208 aaKnown RBP3.64□□□□□ -1.83
SNHG1-202ENST00000535689 HSF1Q00613 529 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 SF3A3Q12874 501 aaKnown RBP eCLIP3.64□□□□□ -1.836e-19■■■□□ 14.9
SNHG1-202ENST00000535689 LMAN2Q12907 356 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 SLC10A2Q12908 348 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-202ENST00000535689 MTAPQ13126 283 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 KCNB1Q14721 858 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 CYP1B1Q16678 543 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 FAM187BQ17R55 369 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 AASDHQ4L235 1098 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-202ENST00000535689 CTXN3Q4LDR2 81 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 ALFQ53S48 1182 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 FAM90A2PQ658T7 463 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 DGAT2L7PQ6IED9 249 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 CCDC70Q6NSX1 233 aa3.64□□□□□ -1.83
SNHG1-202ENST00000535689 KIRREL2Q6UWL6 708 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms