RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 NOVP48745 357 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 ACADVLP49748 655 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 MFAP3P55082 362 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 SNRPFP62306 86 aaKnown RBP6.8□□□□□ -1.32
USP28-202ENST00000535607 CDK16Q00536 496 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 CACNB2Q08289 660 aaPredicted RBP6.8□□□□□ -1.32
USP28-202ENST00000535607 MGAT5Q09328 741 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 TCP10Q12799 353 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 PTP4A2Q12974 167 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 HNRNPDQ14103 355 aaKnown RBP6.8□□□□□ -1.32
USP28-202ENST00000535607 SPIDRQ14159 915 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 SUPT20HL1Q3ZLR7 823 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 PABPC1LQ4VXU2 614 aaKnown RBP6.8□□□□□ -1.32
USP28-202ENST00000535607 CCDC92Q53HC0 331 aaPredicted RBP6.8□□□□□ -1.32
USP28-202ENST00000535607 LGSNQ5TDP6 509 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 WDR78Q5VTH9 848 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 IZUMO3Q5VZ72 239 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 ATG16L1Q676U5 607 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 CGB2Q6NT52 195 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 DPY19L2P1Q6NXN4 242 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 TTC27Q6P3X3 843 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 TMEM179Q6ZVK1 233 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 RASSF3Q86WH2 238 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 LDHDQ86WU2 507 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 RAB3IL1Q8TBN0 382 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 ZNF564Q8TBZ8 553 aaPredicted RBP6.8□□□□□ -1.32
USP28-202ENST00000535607 CALML6Q8TD86 181 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 DENND1AQ8TEH3 1009 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 TRPC4APQ8TEL6 797 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 CPA5Q8WXQ8 436 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 MAML1Q92585 1016 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 ZNF75CPQ92670 426 aaPredicted RBP6.8□□□□□ -1.32
USP28-202ENST00000535607 DLG3Q92796 817 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 FAM20AQ96MK3 541 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 TEPSINQ96N21 525 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 BTBD9Q96Q07 612 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 WRNIP1Q96S55 665 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 ELF4Q99607 663 aaPredicted RBP6.8□□□□□ -1.32
USP28-202ENST00000535607 SLC38A3Q99624 504 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 CADM1Q9BY67 442 aaKnown RBP6.8□□□□□ -1.32
USP28-202ENST00000535607 UBA5Q9GZZ9 404 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 WWP1Q9H0M0 922 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 DEFB129Q9H1M3 183 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 C1orf21Q9H246 121 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 DNAJC18Q9H819 358 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 IL17RBQ9NRM6 502 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 DDX56Q9NY93 547 aaKnown RBP6.8□□□□□ -1.32
USP28-202ENST00000535607 TBK1Q9UHD2 729 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 NR2E1Q9Y466 385 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 IKBKGQ9Y6K9 419 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 ZHX2Q9Y6X8 837 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.8□□□□□ -1.32
USP28-202ENST00000535607 LOXHD1Q8IVV2 1947 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 SSC5DA1L4H1 1573 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 CYP3A7-CYP3A51PA0A087WV96 503 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 IGKV6D-41A0A0C4DH26 115 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 IQANK1A0A1B0GTG1 560 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 CFAP69A5D8W1 941 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 E9PMD0 336 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 CYTH3O43739 400 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 SLC37A4O43826 429 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 PEX1O43933 1283 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 CYP7B1O75881 506 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 AKAP3O75969 853 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 KRT36O76013 467 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 TDP2O95551 362 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 FOSP01100 380 aaPredicted RBP6.79□□□□□ -1.32
USP28-202ENST00000535607 GH1P01241 217 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 S100BP04271 92 aaPredicted RBP6.79□□□□□ -1.32
USP28-202ENST00000535607 ASNSP08243 561 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 T-ENOLP0DO92 83 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 PIM1P11309 404 aaPredicted RBP6.79□□□□□ -1.32
USP28-202ENST00000535607 CYP3A7P24462 503 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 RPL5P46777 297 aaKnown RBP6.79□□□□□ -1.32
USP28-202ENST00000535607 TUBP50607 506 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 SLC12A3P55017 1021 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 GEMIN4P57678 1058 aaKnown RBP6.79□□□□□ -1.32
USP28-202ENST00000535607 SULT2A1Q06520 285 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 DCTN2Q13561 401 aaKnown RBP6.79□□□□□ -1.32
USP28-202ENST00000535607 THOC5Q13769 683 aaKnown RBP6.79□□□□□ -1.32
USP28-202ENST00000535607 MYBPC3Q14896 1274 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 MORF4L2Q15014 288 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 CERKLQ49MI3 558 aaPredicted RBP6.79□□□□□ -1.32
USP28-202ENST00000535607 Q4G0T1 1027 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 GPATCH4Q5T3I0 446 aaKnown RBP6.79□□□□□ -1.32
USP28-202ENST00000535607 LIN9Q5TKA1 542 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 TEPPQ6URK8 271 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 IZUMO2Q6UXV1 221 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 KYAT3Q6YP21 454 aaKnown RBP6.79□□□□□ -1.32
USP28-202ENST00000535607 ANO5Q75V66 913 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 ENOSF1Q7L5Y1 443 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 MAEAQ7L5Y9 396 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 OTOAQ7RTW8 1153 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 ZNF554Q86TJ5 538 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 LRRC6Q86X45 466 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 CHSY1Q86X52 802 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 SFR1Q86XK3 245 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 TMEM126BQ8IUX1 230 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 SYCP3Q8IZU3 236 aa6.79□□□□□ -1.32
USP28-202ENST00000535607 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms