RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 ACDQ96AP0 544 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 RNF157Q96PX1 679 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 DDX56Q9NY93 547 aaKnown RBP13.44□□□□□ -0.26
TMEM258-202ENST00000535042 PACSIN2Q9UNF0 486 aaPredicted RBP13.44□□□□□ -0.26
TMEM258-202ENST00000535042 PLA2G4CQ9UP65 541 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 PCDHA3Q9Y5H8 950 aa13.44□□□□□ -0.26
TMEM258-202ENST00000535042 TTC34A8MYJ7 566 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 K7ERQ8 282 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 CBX4O00257 560 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 SRPRAP08240 638 aaKnown RBP13.43□□□□□ -0.26
TMEM258-202ENST00000535042 TDGF1P13385 188 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 HOXB2P14652 356 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 CCR3P51677 355 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 NDST2P52849 883 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 SULT2A1Q06520 285 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 LLGL1Q15334 1064 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 CRY1Q16526 586 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 TAZQ16635 292 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 FNDC3BQ53EP0 1204 aaKnown RBP13.43□□□□□ -0.26
TMEM258-202ENST00000535042 EOGTQ5NDL2 527 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 NCBP2-AS2Q69YL0 99 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 IL31Q6EBC2 164 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 SERPINA13PQ6UXR4 307 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 LEKR1Q6ZMV7 388 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 PEX26Q7Z412 305 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 TRMT11Q7Z4G4 463 aaKnown RBP13.43□□□□□ -0.26
TMEM258-202ENST00000535042 KATNAL2Q8IYT4 538 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 SYCE1Q8N0S2 351 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 HHIPQ96QV1 700 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 C2orf49Q9BVC5 232 aaPredicted RBP13.43□□□□□ -0.26
TMEM258-202ENST00000535042 PRMT8Q9NR22 394 aaPredicted RBP13.43□□□□□ -0.26
TMEM258-202ENST00000535042 TRMT1Q9NXH9 659 aaKnown RBP13.43□□□□□ -0.26
TMEM258-202ENST00000535042 AMFRQ9UKV5 643 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 DOCK4Q8N1I0 1966 aa13.43□□□□□ -0.26
TMEM258-202ENST00000535042 KMT2EQ8IZD2 1858 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 USP27XA6NNY8 438 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 ZNF487B1APH4 448 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 NPC1O15118 1278 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 DDX3YO15523 660 aaKnown RBP13.42□□□□□ -0.26
TMEM258-202ENST00000535042 LAMTOR5O43504 91 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 SMAD6O43541 496 aaKnown RBP13.42□□□□□ -0.26
TMEM258-202ENST00000535042 GALR2O43603 387 aaPredicted RBP13.42□□□□□ -0.26
TMEM258-202ENST00000535042 KDELR3O43731 214 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 ABCB7O75027 752 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 PAPSS2O95340 614 aaPredicted RBP13.42□□□□□ -0.26
TMEM258-202ENST00000535042 SRCP12931 536 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 KRT10P13645 584 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 VAV1P15498 845 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 ETFBP38117 255 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 CDKN2BP42772 138 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 PAPOLAP51003 745 aaKnown RBP13.42□□□□□ -0.26
TMEM258-202ENST00000535042 DMWDQ09019 674 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 SERINC3Q13530 473 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 PAFAH1B3Q15102 231 aaKnown RBP13.42□□□□□ -0.26
TMEM258-202ENST00000535042 PARP15Q460N3 678 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 SDE2Q6IQ49 451 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 TMCO3Q6UWJ1 677 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 SPOCD1Q6ZMY3 1216 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 ARHGAP36Q6ZRI8 547 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 KDM1BQ8NB78 822 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 FRS2Q8WU20 508 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 HERPUD2Q9BSE4 406 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 DONSONQ9NYP3 566 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 SLC8A2Q9UPR5 921 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 HS3ST2Q9Y278 367 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.42□□□□□ -0.26
TMEM258-202ENST00000535042 ATG2BQ96BY7 2078 aa13.42□□□□□ -0.26
TMEM258-202ENST00000535042 MUC22E2RYF6 1773 aaPredicted RBP13.42□□□□□ -0.26
TMEM258-202ENST00000535042 CCDC66A2RUB6 948 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 J3KR12 359 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 DFFAO00273 331 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 ATP9BO43861 1147 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 MFSD11O43934 449 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 ZRANB2O95218 330 aaKnown RBP eCLIP13.41□□□□□ -0.26
TMEM258-202ENST00000535042 MAP3K6O95382 1288 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 EPHX1P07099 455 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 PXNP49023 591 aaPredicted RBP13.41□□□□□ -0.26
TMEM258-202ENST00000535042 VASPP50552 380 aaPredicted RBP13.41□□□□□ -0.26
TMEM258-202ENST00000535042 ST8SIA6P61647 398 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 GBE1Q04446 702 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 CSTF1Q05048 431 aaKnown RBP13.41□□□□□ -0.26
TMEM258-202ENST00000535042 ADCY2Q08462 1091 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 SLC10A2Q12908 348 aaPredicted RBP13.41□□□□□ -0.26
TMEM258-202ENST00000535042 ANGPT1Q15389 498 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 HNRNPA1L2Q32P51 320 aaKnown RBP13.41□□□□□ -0.26
TMEM258-202ENST00000535042 SLC9A4Q6AI14 798 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 AADACL2Q6P093 401 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 VSIG1Q86XK7 387 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 RCOR2Q8IZ40 523 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 SH2D3CQ8N5H7 860 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 LZTR1Q8N653 840 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 PLD5Q8N7P1 536 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 PRSS33Q8NF86 280 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 EXD1Q8NHP7 514 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 HES6Q96HZ4 224 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 PDFQ9HBH1 243 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 PRSS16Q9NQE7 514 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 SLC25A13Q9UJS0 675 aa13.41□□□□□ -0.26
TMEM258-202ENST00000535042 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.41□□□□□ -0.26
TMEM258-202ENST00000535042 hCG_1818297A0A087WSY0 165 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms