RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 HARS2P49590 506 aaKnown RBP13.67□□□□□ -0.22
BEST1-208ENST00000534553 PAPOLAP51003 745 aaKnown RBP13.67□□□□□ -0.22
BEST1-208ENST00000534553 C1QTNF8P60827 252 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 MPP3Q13368 585 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 RAB33AQ14088 237 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 QPCTQ16769 361 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 C5orf22Q49AR2 442 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 C6orf89Q6UWU4 347 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 C14orf80Q86SX3 495 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 DDX53Q86TM3 631 aaKnown RBP13.67□□□□□ -0.22
BEST1-208ENST00000534553 CNTD1Q8N815 330 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.67□□□□□ -0.22
BEST1-208ENST00000534553 LRRC8CQ8TDW0 803 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 PLD4Q96BZ4 506 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 CERS2Q96G23 380 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 MLPHQ9BV36 600 aaPredicted RBP13.67□□□□□ -0.22
BEST1-208ENST00000534553 NACA2Q9H009 215 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 SPG21Q9NZD8 308 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 TRPM5Q9NZQ8 1165 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 ZFATQ9P243 1243 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 RPS6KL1Q9Y6S9 549 aa13.67□□□□□ -0.22
BEST1-208ENST00000534553 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.66□□□□□ -0.22
BEST1-208ENST00000534553 F5H5T6 163 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 COPEO14579 308 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 RAMP2O60895 175 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 SLC11A2P49281 568 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 PPARDQ03181 441 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 BTG3Q14201 252 aaPredicted RBP13.66□□□□□ -0.22
BEST1-208ENST00000534553 TAF12Q16514 161 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 HECTD3Q5T447 861 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 FBXL22Q6P050 247 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 TRMT10BQ6PF06 316 aaKnown RBP13.66□□□□□ -0.22
BEST1-208ENST00000534553 LVRNQ6Q4G3 990 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 POTEHQ6S545 545 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 SH2D5Q6ZV89 423 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 CHSY1Q86X52 802 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 TCP10LQ8TDR4 215 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 GIPC2Q8TF65 315 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 ZNF512Q96ME7 567 aaPredicted RBP13.66□□□□□ -0.22
BEST1-208ENST00000534553 RPRD1AQ96P16 312 aaPredicted RBP13.66□□□□□ -0.22
BEST1-208ENST00000534553 CPNE1Q99829 537 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 PAIP2Q9BPZ3 127 aaKnown RBP13.66□□□□□ -0.22
BEST1-208ENST00000534553 CLSTN3Q9BQT9 956 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 VN1R3Q9BXE9 311 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 MPP6Q9NZW5 540 aa13.66□□□□□ -0.22
BEST1-208ENST00000534553 MAGED2Q9UNF1 606 aaPredicted RBP13.66□□□□□ -0.22
BEST1-208ENST00000534553 RRP15Q9Y3B9 282 aaKnown RBP13.66□□□□□ -0.22
BEST1-208ENST00000534553 CXorf49A8MYA2 514 aaPredicted RBP13.65□□□□□ -0.22
BEST1-208ENST00000534553 F5H423 210 aaPredicted RBP13.65□□□□□ -0.22
BEST1-208ENST00000534553 TBX18O95935 607 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 TAC1P20366 129 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 GP5P40197 560 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 NEK3P51956 506 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 PLD1Q13393 1074 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 DBN1Q16643 649 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 RABGAP1LQ5R372 815 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 STXBP5Q5T5C0 1151 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 TRIM42Q8IWZ5 723 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 DIS3LQ8TF46 1054 aaKnown RBP13.65□□□□□ -0.22
BEST1-208ENST00000534553 ATP2A3Q93084 1043 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 VWCEQ96DN2 955 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 DDX50Q9BQ39 737 aaKnown RBP13.65□□□□□ -0.22
BEST1-208ENST00000534553 TBL1YQ9BQ87 522 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 FSD1LQ9BXM9 530 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 PITPNM3Q9BZ71 974 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 SLC25A51Q9H1U9 297 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 CCSER2Q9H7U1 834 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 SP110Q9HB58 689 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 MRM3Q9HC36 420 aaKnown RBP13.65□□□□□ -0.22
BEST1-208ENST00000534553 MLXIPLQ9NP71 852 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 SMYD2Q9NRG4 433 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 RBM22Q9NW64 420 aaKnown RBP eCLIP13.65□□□□□ -0.22
BEST1-208ENST00000534553 SOX13Q9UN79 622 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 STARD13Q9Y3M8 1113 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 USP15Q9Y4E8 981 aaPredicted RBP13.65□□□□□ -0.22
BEST1-208ENST00000534553 COL4A6Q14031 1691 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 ZNF638Q14966 1978 aaKnown RBP13.65□□□□□ -0.22
BEST1-208ENST00000534553 GREB1Q4ZG55 1949 aa13.65□□□□□ -0.22
BEST1-208ENST00000534553 ZNF840PA6NDX5 716 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 ADAM12O43184 909 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 OAS1P00973 400 aaKnown RBP13.64□□□□□ -0.23
BEST1-208ENST00000534553 DHRS4L1P0CG22 281 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 PYGBP11216 843 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 TACR2P21452 398 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 ELF1P32519 619 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 WDR5P61964 334 aaKnown RBP13.64□□□□□ -0.23
BEST1-208ENST00000534553 IL10RBQ08334 325 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 PCID2Q5JVF3 399 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 GRTP1Q5TC63 336 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 MARC1Q5VT66 337 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 RAP1GAP2Q684P5 730 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 CCDC121Q6ZUS5 278 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 NECAB2Q7Z6G3 386 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 OTUD6BQ8N6M0 293 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 SERAC1Q96JX3 654 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 ZNF599Q96NL3 588 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 KIFC1Q9BW19 673 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 CYP4F11Q9HBI6 524 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 NDFIP2Q9NV92 336 aa13.64□□□□□ -0.23
BEST1-208ENST00000534553 FGFR1OP2Q9NVK5 253 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms