RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	MID1IP1	Q9NPA3	183 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SLC27A6	Q9Y2P4	619 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ASTN2	O75129	1339 aa	Predicted RBP	15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GRM6	O15303	877 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	BAIAP3	O94812	1187 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	WDR47	O94967	919 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	S100A5	P33763	92 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PLOD1	Q02809	727 aa	Predicted RBP	15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SPIDR	Q14159	915 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ZSWIM2	Q8NEG5	633 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	VPS33A	Q96AX1	596 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SEMA3C	Q99985	751 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CAAP1	Q9H8G2	361 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PIH1D1	Q9NWS0	290 aa	Known RBP	15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	HEY2	Q9UBP5	337 aa		15.98	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SMIM28	A0A1B0GU29	152 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	URAD	A6NGE7	173 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	NEDD8-MDP1	E9PL57	170 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TRIM13	O60858	407 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GCAT	O75600	419 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CASP5	P51878	434 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GSTA3	Q16772	222 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MPPE1	Q53F39	396 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PPP1R15B	Q5SWA1	713 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	KLHL35	Q6PF15	583 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	OSBPL10	Q9BXB5	764 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532		A0A087X0B3	334 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TPST1	O60507	370 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ATP4A	P20648	1035 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	IRF8	Q02556	426 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	OR5B17	Q8NGF7	314 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	C11orf84	Q9BUA3	381 aa	Predicted RBP	15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	OSBPL1A	Q9BXW6	950 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	RIPK3	Q9Y572	518 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MROH2A	A6NES4	1674 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532		A0A087X1B8	175 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	VPS4B	O75351	444 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MATK	P42679	507 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ABL2	P42684	1182 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TTPA	P49638	278 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	USP39	Q53GS9	565 aa	Known RBP	15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PSRC1	Q6PGN9	363 aa	Predicted RBP	15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	IYD	Q6PHW0	289 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	AFTPH	Q6ULP2	937 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ADCK1	Q86TW2	530 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GLI1	P08151	1106 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ABCB1	P08183	1280 aa	Predicted RBP	15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ENO2	P09104	434 aa	Predicted RBP	15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	HPCAL1	P37235	193 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MAMLD1	Q13495	774 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	DPYSL3	Q14195	570 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	FNDC5	Q8NAU1	212 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	KAT5	Q92993	513 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TSC22D3	Q99576	134 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SNRNP25	Q9BV90	132 aa	Known RBP	15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	RHBG	Q9H310	441 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	RAD21L1	Q9H4I0	556 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	VTI1B	Q9UEU0	232 aa		15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	AGO1	Q9UL18	857 aa	Known RBP	15.97	■□□□□ 0.15
NCAPD3-213	ENST00000534532	C1orf232	A0A0U1RR37	186 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CCL16	O15467	120 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	RGS14	O43566	566 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MAN1A2	O60476	641 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	UQCRB	P14927	111 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	NTS	P30990	170 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	AQP5	P55064	265 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ASTN1	O14525	1302 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	USP12	O75317	370 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	IFNA16	P05015	189 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CES3	Q6UWW8	571 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	FAM124A	Q86V42	546 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MDM1	Q8TC05	714 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ARNTL2	Q8WYA1	636 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	USE1	Q9NZ43	259 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SAE1	Q9UBE0	346 aa	Predicted RBP	15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MORC2	Q9Y6X9	1032 aa	Predicted RBP	15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CES2	O00748	559 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SLC35G4	P0C7Q5	338 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TAF10	Q12962	218 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	IFNL1	Q8IU54	200 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CYP4X1	Q8N118	509 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	BSND	Q8WZ55	320 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CERS4	Q9HA82	394 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CLUH	O75153	1309 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SMIM22	K7EJ46	135 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CLDN5	O00501	218 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CLDN11	O75508	207 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PABPC1	P11940	636 aa	Known RBP	15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PECAM1	P16284	738 aa	Predicted RBP	15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	AIF1	P55008	147 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TOMM20	Q15388	145 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	BNC2	Q6ZN30	1099 aa	Predicted RBP	15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	NAT16	Q8N8M0	369 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GPR152	Q8TDT2	470 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GLMN	Q92990	594 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MTMR8	Q96EF0	704 aa		15.96	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SERPINE1	P05121	402 aa		15.96	■□□□□ 0.14

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms