RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 PDLIM1O00151 329 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 CAPN15O75808 1086 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 ENDOD1O94919 500 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 EPCAMP16422 314 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 STIP1P31948 543 aaKnown RBP9.8□□□□□ -0.84
RTL1-201ENST00000534062 MPP3Q13368 585 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 AUHQ13825 339 aaKnown RBP9.8□□□□□ -0.84
RTL1-201ENST00000534062 PRPSAP1Q14558 356 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 OASLQ15646 514 aaKnown RBP9.8□□□□□ -0.84
RTL1-201ENST00000534062 TRIP4Q15650 581 aaPredicted RBP9.8□□□□□ -0.84
RTL1-201ENST00000534062 TCEAL8Q8IYN2 117 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 PDIK1LQ8N165 341 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 BBS5Q8N3I7 341 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 TEX9Q8N6V9 391 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 ST13P5Q8NFI4 369 aaPredicted RBP9.8□□□□□ -0.84
RTL1-201ENST00000534062 CLP1Q92989 425 aaKnown RBP9.8□□□□□ -0.84
RTL1-201ENST00000534062 TLE6Q9H808 572 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 PCDH9Q9HC56 1237 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 KRT16P08779 473 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 DNAJB1P25685 340 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 CORO1AP31146 461 aaKnown RBP9.8□□□□□ -0.84
RTL1-201ENST00000534062 AIF1P55008 147 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 SLC9A4Q6AI14 798 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 PSTKQ8IV42 348 aaKnown RBP9.8□□□□□ -0.84
RTL1-201ENST00000534062 RNF168Q8IYW5 571 aaPredicted RBP9.8□□□□□ -0.84
RTL1-201ENST00000534062 MRPL43Q8N983 215 aaKnown RBP9.8□□□□□ -0.84
RTL1-201ENST00000534062 GDPD5Q8WTR4 605 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 HTR3CQ8WXA8 447 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 BTN2A3PQ96KV6 586 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 KLC2Q9H0B6 622 aa9.8□□□□□ -0.84
RTL1-201ENST00000534062 SMG9Q9H0W8 520 aaKnown RBP9.8□□□□□ -0.84
RTL1-201ENST00000534062 ZNF334Q9HCZ1 680 aaPredicted RBP9.8□□□□□ -0.84
RTL1-201ENST00000534062 PIH1D1Q9NWS0 290 aaKnown RBP9.8□□□□□ -0.84
RTL1-201ENST00000534062 DRG1Q9Y295 367 aaKnown RBP9.8□□□□□ -0.84
RTL1-201ENST00000534062 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.8□□□□□ -0.84
RTL1-201ENST00000534062 C2orf71A6NGG8 1288 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 GSTA1P08263 222 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 SP100P23497 879 aaPredicted RBP9.79□□□□□ -0.84
RTL1-201ENST00000534062 SMAD1Q15797 465 aaKnown RBP9.79□□□□□ -0.84
RTL1-201ENST00000534062 SLC45A4Q5BKX6 768 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 KDELC2Q7Z4H8 507 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 ANKMY2Q8IV38 441 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 KIF2BQ8N4N8 673 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 ARL10Q8N8L6 244 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 ANKS4BQ8N8V4 417 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 ING5Q8WYH8 240 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 PGAP3Q96FM1 320 aaPredicted RBP9.79□□□□□ -0.84
RTL1-201ENST00000534062 CDK5RAP1Q96SZ6 601 aaKnown RBP9.79□□□□□ -0.84
RTL1-201ENST00000534062 CFAP73A6NFT4 308 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 RNF103O00237 685 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 RFXAPO00287 272 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 JCHAINP01591 159 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 HMGA1P17096 107 aaKnown RBP9.79□□□□□ -0.84
RTL1-201ENST00000534062 MX2P20592 715 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 OR1E1P30953 314 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 AVPR1AP37288 418 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 NR2C2P49116 596 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 PIK3R6Q5UE93 754 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 TMC5Q6UXY8 1006 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 SCML4Q8N228 414 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 MREGQ8N565 214 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 C12orf76Q8N812 135 aaPredicted RBP9.79□□□□□ -0.84
RTL1-201ENST00000534062 FRMD8P1Q9BZ68 369 aaPredicted RBP9.79□□□□□ -0.84
RTL1-201ENST00000534062 UBP1Q9NZI7 540 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 GGT7Q9UJ14 662 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 NEU2Q9Y3R4 380 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 CPQQ9Y646 472 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 CHKAP35790 457 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 ETFBP38117 255 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 PMS2P54278 862 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 SLC12A2P55011 1212 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 NCALDP61601 193 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 PDIA2Q13087 525 aaKnown RBP9.79□□□□□ -0.84
RTL1-201ENST00000534062 ZBED8Q8IZ13 594 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 PSMG2Q969U7 264 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 IFT43Q96FT9 208 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 SLC22A12Q96S37 553 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 RBM15Q96T37 977 aaKnown RBP eCLIP9.79□□□□□ -0.84
RTL1-201ENST00000534062 RNF38Q9H0F5 515 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 SP110Q9HB58 689 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 LRRC4CQ9HCJ2 640 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 ABCF3Q9NUQ8 709 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 GRHL1Q9NZI5 618 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 FNIP2Q9P278 1114 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 RCOR3Q9P2K3 495 aaPredicted RBP9.79□□□□□ -0.84
RTL1-201ENST00000534062 STK39Q9UEW8 545 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 MYO16Q9Y6X6 1858 aa9.79□□□□□ -0.84
RTL1-201ENST00000534062 CFAP69A5D8W1 941 aa9.78□□□□□ -0.84
RTL1-201ENST00000534062 BANF1O75531 89 aa9.78□□□□□ -0.84
RTL1-201ENST00000534062 CNTN5O94779 1100 aa9.78□□□□□ -0.84
RTL1-201ENST00000534062 KPNA1P52294 538 aaPredicted RBP9.78□□□□□ -0.84
RTL1-201ENST00000534062 MS4A13Q5J8X5 152 aa9.78□□□□□ -0.84
RTL1-201ENST00000534062 STXBP5Q5T5C0 1151 aa9.78□□□□□ -0.84
RTL1-201ENST00000534062 TMEM154Q6P9G4 183 aa9.78□□□□□ -0.84
RTL1-201ENST00000534062 NPWQ8N729 165 aa9.78□□□□□ -0.84
RTL1-201ENST00000534062 CCDC197Q8NCU1 140 aa9.78□□□□□ -0.84
RTL1-201ENST00000534062 P2RY11Q96G91 374 aa9.78□□□□□ -0.84
RTL1-201ENST00000534062 PLK2Q9NYY3 685 aa9.78□□□□□ -0.84
RTL1-201ENST00000534062 WHRNQ9P202 907 aa9.78□□□□□ -0.84
RTL1-201ENST00000534062 PAK5Q9P286 719 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms