RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 ZNF487B1APH4 448 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 BNIP3LO60238 219 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 ASLP04424 464 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 DLDP09622 509 aaKnown RBP17.85■□□□□ 0.45
NXF1-216ENST00000533499 NNMTP40261 264 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 PLK1P53350 603 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 PAFAH1B3Q15102 231 aaKnown RBP17.85■□□□□ 0.45
NXF1-216ENST00000533499 PPP2R5EQ16537 467 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 RETSATQ6NUM9 610 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 SERPINA13PQ6UXR4 307 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 ADAT2Q7Z6V5 191 aaKnown RBP17.85■□□□□ 0.45
NXF1-216ENST00000533499 KIAA0907Q7Z7F0 614 aaPredicted RBP17.85■□□□□ 0.45
NXF1-216ENST00000533499 VSIG1Q86XK7 387 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 ARHGAP12Q8IWW6 846 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 CCDC105Q8IYK2 499 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 PLD5Q8N7P1 536 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 ZNF366Q8N895 744 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 DCAF4L2Q8NA75 395 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 ATP11CQ8NB49 1132 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 CCNYQ8ND76 341 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 CCDC26Q8TAB7 109 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 UBE2Q2Q8WVN8 375 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 TTC17Q96AE7 1141 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 ALG14Q96F25 216 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 C16orf45Q96MC5 204 aaPredicted RBP17.85■□□□□ 0.45
NXF1-216ENST00000533499 ACOX2Q99424 681 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 KLC2Q9H0B6 622 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 KCND1Q9NSA2 647 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 CACNA2D2Q9NY47 1150 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 SAE1Q9UBE0 346 aaPredicted RBP17.85■□□□□ 0.45
NXF1-216ENST00000533499 OR51B4Q9Y5P0 310 aa17.85■□□□□ 0.45
NXF1-216ENST00000533499 A0A0A0MRY4 1105 aa17.84■□□□□ 0.45
NXF1-216ENST00000533499 KDELR3O43731 214 aa17.84■□□□□ 0.45
NXF1-216ENST00000533499 TJP3O95049 919 aa17.84■□□□□ 0.45
NXF1-216ENST00000533499 ADCY2Q08462 1091 aa17.84■□□□□ 0.45
NXF1-216ENST00000533499 SERINC3Q13530 473 aa17.84■□□□□ 0.45
NXF1-216ENST00000533499 ZNF234Q14588 700 aa17.84■□□□□ 0.45
NXF1-216ENST00000533499 CWF19L1Q69YN2 538 aaKnown RBP17.84■□□□□ 0.45
NXF1-216ENST00000533499 SLC9A4Q6AI14 798 aa17.84■□□□□ 0.45
NXF1-216ENST00000533499 ARHGAP36Q6ZRI8 547 aa17.84■□□□□ 0.45
NXF1-216ENST00000533499 TXNDC5Q8NBS9 432 aaKnown RBP17.84■□□□□ 0.45
NXF1-216ENST00000533499 USP33Q8TEY7 942 aa17.84■□□□□ 0.45
NXF1-216ENST00000533499 P3H4Q92791 437 aa17.84■□□□□ 0.45
NXF1-216ENST00000533499 NAPGQ99747 312 aaPredicted RBP17.84■□□□□ 0.45
NXF1-216ENST00000533499 HERPUD2Q9BSE4 406 aa17.84■□□□□ 0.45
NXF1-216ENST00000533499 LRRC19Q9H756 370 aa17.84■□□□□ 0.45
NXF1-216ENST00000533499 SLCO3A1Q9UIG8 710 aa17.84■□□□□ 0.45
NXF1-216ENST00000533499 ACTL7AQ9Y615 435 aa17.84■□□□□ 0.45
NXF1-216ENST00000533499 SHROOM3Q8TF72 1996 aa17.84■□□□□ 0.45
NXF1-216ENST00000533499 CTAGE9A4FU28 777 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 WASH3PC4AMC7 463 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 J3KR12 359 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 PI15O43692 258 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 HLA-EP13747 358 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 PECAM1P16284 738 aaPredicted RBP17.83■□□□□ 0.44
NXF1-216ENST00000533499 TGM2P21980 687 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 CASQ1P31415 396 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 MRPS21P82921 87 aaKnown RBP17.83■□□□□ 0.44
NXF1-216ENST00000533499 E2F5Q15329 346 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 TAZQ16635 292 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 SYT10Q6XYQ8 523 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 BBS12Q6ZW61 710 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 B4GALNT4Q76KP1 1039 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 ACDQ96AP0 544 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 FAM118BQ9BPY3 351 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 ACE2Q9BYF1 805 aaPredicted RBP17.83■□□□□ 0.44
NXF1-216ENST00000533499 CARD9Q9H257 536 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 PRDM16Q9HAZ2 1276 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 THAP10Q9P2Z0 257 aaPredicted RBP17.83■□□□□ 0.44
NXF1-216ENST00000533499 IPO11Q9UI26 975 aaKnown RBP17.83■□□□□ 0.44
NXF1-216ENST00000533499 SLC8A2Q9UPR5 921 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 RAD54BQ9Y620 910 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 STON1Q9Y6Q2 735 aa17.83■□□□□ 0.44
NXF1-216ENST00000533499 NYNRINQ9P2P1 1898 aaKnown RBP17.82■□□□□ 0.44
NXF1-216ENST00000533499 TTC34A8MYJ7 566 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 K7ERQ8 282 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 NEBLO76041 1014 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 MT-CO1P00395 513 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 EPHX1P07099 455 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 SRPRAP08240 638 aaKnown RBP17.82■□□□□ 0.44
NXF1-216ENST00000533499 MX2P20592 715 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 IL12RB1P42701 662 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 KIR2DL1P43626 348 aaPredicted RBP17.82■□□□□ 0.44
NXF1-216ENST00000533499 ARF5P84085 180 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 SLC10A2Q12908 348 aaPredicted RBP17.82■□□□□ 0.44
NXF1-216ENST00000533499 PTPRNQ16849 979 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 AFMIDQ63HM1 303 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 PKN3Q6P5Z2 889 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 TRMT11Q7Z4G4 463 aaKnown RBP17.82■□□□□ 0.44
NXF1-216ENST00000533499 ZC3H18Q86VM9 953 aaKnown RBP17.82■□□□□ 0.44
NXF1-216ENST00000533499 ZNF687Q8N1G0 1237 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 SYNPOQ8N3V7 929 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 NSMCE1Q8WV22 266 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 ZNF592Q92610 1267 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 OSBPL6Q9BZF3 934 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 MTG2Q9H4K7 406 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 POLR3BQ9NW08 1133 aaPredicted RBP17.82■□□□□ 0.44
NXF1-216ENST00000533499 DTLQ9NZJ0 730 aa17.82■□□□□ 0.44
NXF1-216ENST00000533499 UBA2Q9UBT2 640 aaPredicted RBP17.82■□□□□ 0.44
NXF1-216ENST00000533499 HCN2Q9UL51 889 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms