RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 C2CD4BA6NLJ0 364 aa18.27■□□□□ 0.52
SMG1-203ENST00000532700 SRGAP2O75044 1071 aa18.27■□□□□ 0.52
SMG1-203ENST00000532700 IL1BP01584 269 aa18.27■□□□□ 0.52
SMG1-203ENST00000532700 RHOCP08134 193 aa18.27■□□□□ 0.52
SMG1-203ENST00000532700 RDXP35241 583 aaKnown RBP18.27■□□□□ 0.52
SMG1-203ENST00000532700 STAT1P42224 750 aa18.27■□□□□ 0.52
SMG1-203ENST00000532700 SIM1P81133 766 aaPredicted RBP18.27■□□□□ 0.52
SMG1-203ENST00000532700 ELAVL3Q14576 367 aaKnown RBP18.27■□□□□ 0.52
SMG1-203ENST00000532700 MANEALQ5VSG8 457 aa18.27■□□□□ 0.52
SMG1-203ENST00000532700 E4F1Q66K89 784 aaPredicted RBP18.27■□□□□ 0.52
SMG1-203ENST00000532700 MON1BQ7L1V2 547 aa18.27■□□□□ 0.52
SMG1-203ENST00000532700 NAXDQ8IW45 347 aa18.27■□□□□ 0.52
SMG1-203ENST00000532700 NEK11Q8NG66 645 aa18.27■□□□□ 0.52
SMG1-203ENST00000532700 FAM131CQ96AQ9 280 aa18.27■□□□□ 0.52
SMG1-203ENST00000532700 PCMTD1Q96MG8 357 aaPredicted RBP18.27■□□□□ 0.52
SMG1-203ENST00000532700 BPIFA3Q9BQP9 254 aa18.27■□□□□ 0.52
SMG1-203ENST00000532700 SYT11Q9BT88 431 aa18.27■□□□□ 0.52
SMG1-203ENST00000532700 MUC3BQ9H195 1237 aa18.27■□□□□ 0.52
SMG1-203ENST00000532700 CAAP1Q9H8G2 361 aa18.27■□□□□ 0.52
SMG1-203ENST00000532700 USP24Q9UPU5 2620 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 ASPMQ8IZT6 3477 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 SMTNL1A8MU46 457 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 C1QTNF9BB2RNN3 333 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 HYAL3O43820 417 aaPredicted RBP18.26■□□□□ 0.51
SMG1-203ENST00000532700 BNIP3LO60238 219 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 CBFA2T3O75081 653 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 ZNF821O75541 412 aaPredicted RBP18.26■□□□□ 0.51
SMG1-203ENST00000532700 KRT37O76014 449 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 C1QTNF9P0C862 333 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 CD27P26842 260 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 RFC1P35251 1148 aaPredicted RBP18.26■□□□□ 0.51
SMG1-203ENST00000532700 HDAC4P56524 1084 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 ACCSLQ4AC99 568 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 PRAMEF14Q5SWL7 426 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.26■□□□□ 0.51
SMG1-203ENST00000532700 CHST14Q8NCH0 376 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 C1orf74Q96LT6 269 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 OMDQ99983 421 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 FUCA2Q9BTY2 467 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 SCNM1Q9BWG6 230 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 TAS2R14Q9NYV8 317 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 SLC25A13Q9UJS0 675 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 KLK13Q9UKR3 277 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 FZD4Q9ULV1 537 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 ANKRD6Q9Y2G4 727 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 WDFY3Q8IZQ1 3526 aa18.26■□□□□ 0.51
SMG1-203ENST00000532700 TPRP12270 2363 aaKnown RBP18.25■□□□□ 0.51
SMG1-203ENST00000532700 RNASEH1O60930 286 aaKnown RBP18.25■□□□□ 0.51
SMG1-203ENST00000532700 ZMPSTE24O75844 475 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 F9P00740 461 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 GOT1P17174 413 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 CDK11BP21127 795 aaKnown RBP18.25■□□□□ 0.51
SMG1-203ENST00000532700 C5AR1P21730 350 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 VASPP50552 380 aaPredicted RBP18.25■□□□□ 0.51
SMG1-203ENST00000532700 AFF3P51826 1226 aaKnown RBP18.25■□□□□ 0.51
SMG1-203ENST00000532700 TAS2R38P59533 333 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 IL9RQ01113 521 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 SULT2A1Q06520 285 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 CNTN1Q12860 1018 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 AGBL4Q5VU57 503 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 SND1Q7KZF4 910 aaKnown RBP eCLIP18.25■□□□□ 0.51
SMG1-203ENST00000532700 ARCQ7LC44 396 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 DRC7Q8IY82 874 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 OR14C36Q8NHC7 312 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 BAP1Q92560 729 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 VOPP1Q96AW1 172 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 HAPLN3Q96S86 360 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 TNKS2Q9H2K2 1166 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 TM7SF3Q9NS93 570 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 PPM1HQ9ULR3 514 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 SCML1Q9UN30 329 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 HS3ST2Q9Y278 367 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 NCKAP1Q9Y2A7 1128 aa18.25■□□□□ 0.51
SMG1-203ENST00000532700 PTPRBP23467 1997 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 A0A1W2PPC4 97 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 H0Y8X5 98 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 CD160O95971 181 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 ADH1BP00325 375 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 ACVRL1P37023 503 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 CTSKP43235 329 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 GRIA4P48058 902 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 ZNF165P49910 485 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 RPL7AP62424 266 aaKnown RBP18.24■□□□□ 0.51
SMG1-203ENST00000532700 ARF5P84085 180 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 OGDHQ02218 1023 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 NFKBIBQ15653 356 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 ZSCAN23Q3MJ62 389 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 WDR59Q6PJI9 974 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 IRF2BP2Q7Z5L9 587 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 PHF13Q86YI8 300 aaPredicted RBP18.24■□□□□ 0.51
SMG1-203ENST00000532700 PYROXD2Q8N2H3 581 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 PNPLA1Q8N8W4 532 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 DCAF4L2Q8NA75 395 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 OR2A12Q8NGT7 310 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 OR2T34Q8NGX1 318 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 BAHD1Q8TBE0 780 aaPredicted RBP18.24■□□□□ 0.51
SMG1-203ENST00000532700 PIP4K2CQ8TBX8 421 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 CENPIQ92674 756 aaPredicted RBP18.24■□□□□ 0.51
SMG1-203ENST00000532700 ARRDC3Q96B67 414 aa18.24■□□□□ 0.51
SMG1-203ENST00000532700 NAP1L5Q96NT1 182 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms