RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 MANSC1Q9H8J5 431 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 SSU72Q9NP77 194 aaKnown RBP15.5■□□□□ 0.07
SRPRA-206ENST00000532259 ZNF180Q9UJW8 692 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 ARL2BPQ9Y2Y0 163 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 TPP1O14773 563 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 MTSS1O43312 755 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 EDF1O60869 148 aaKnown RBP15.5■□□□□ 0.07
SRPRA-206ENST00000532259 ALDH1A2O94788 518 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 CSPG5O95196 566 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 SEC24AO95486 1093 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 ETV4P43268 484 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 DEFB103AP81534 67 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 ITKQ08881 620 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 NIPAL4Q0D2K0 466 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 PPM1JQ5JR12 505 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 KIAA1841Q6NSI8 718 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 FBXL22Q6P050 247 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 ANKS3Q6ZW76 656 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 FITM2Q8N6M3 262 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 CDKL2Q92772 493 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 CERS2Q96G23 380 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 RASSF4Q9H2L5 321 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 ZNF395Q9H8N7 513 aaPredicted RBP15.5■□□□□ 0.07
SRPRA-206ENST00000532259 CASS4Q9NQ75 786 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 TLR8Q9NR97 1041 aaKnown RBP15.5■□□□□ 0.07
SRPRA-206ENST00000532259 KLHL14Q9P2G3 628 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 TXNDC16Q9P2K2 825 aa15.5■□□□□ 0.07
SRPRA-206ENST00000532259 IPO11Q9UI26 975 aaKnown RBP15.5■□□□□ 0.07
SRPRA-206ENST00000532259 SLC38A8A6NNN8 435 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 FGF10O15520 208 aaPredicted RBP15.49■□□□□ 0.07
SRPRA-206ENST00000532259 TLR5O60602 858 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 GSTA2P09210 222 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 NMBRP28336 390 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 CHRNA4P43681 627 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 ZNF135P52742 658 aaPredicted RBP15.49■□□□□ 0.07
SRPRA-206ENST00000532259 COG7P83436 770 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 PDE1BQ01064 536 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 CMC1Q7Z7K0 106 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 DNAJC5GQ8N7S2 189 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 HMCESQ96FZ2 354 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 RPRD1AQ96P16 312 aaPredicted RBP15.49■□□□□ 0.07
SRPRA-206ENST00000532259 FICDQ9BVA6 458 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 BRD8Q9H0E9 1235 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 TANC1Q9C0D5 1861 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 ATXN2Q99700 1313 aaKnown RBP15.49■□□□□ 0.07
SRPRA-206ENST00000532259 HOXA2O43364 376 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 GJB5O95377 273 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 ALDOAP04075 364 aaKnown RBP15.49■□□□□ 0.07
SRPRA-206ENST00000532259 CCNCP24863 283 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 DNAJB2P25686 324 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 ETFBP38117 255 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 SERPINB4P48594 390 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 ACTN3Q08043 901 aaPredicted RBP15.49■□□□□ 0.07
SRPRA-206ENST00000532259 PRPSAP1Q14558 356 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 NADSYN1Q6IA69 706 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 RFWD3Q6PCD5 774 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 IGSF21Q96ID5 467 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 CLSTN3Q9BQT9 956 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 TMEM175Q9BSA9 504 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 NACA2Q9H009 215 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 LRRC40Q9H9A6 602 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 PRKAG3Q9UGI9 489 aa15.49■□□□□ 0.07
SRPRA-206ENST00000532259 DOCK4Q8N1I0 1966 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 C2orf71A6NGG8 1288 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 MATN3O15232 486 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 GJB3O75712 270 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 SAT1P21673 171 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 ANKRD20A4Q4UJ75 823 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 ZCCHC23Q6ZST2 131 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.48■□□□□ 0.07
SRPRA-206ENST00000532259 ZNF512Q96ME7 567 aaPredicted RBP15.48■□□□□ 0.07
SRPRA-206ENST00000532259 TSGA13Q96PP4 275 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 KDM4CQ9H3R0 1056 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 CAB39LQ9H9S4 337 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 GLOD4Q9HC38 313 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 PRDM5Q9NQX1 630 aaPredicted RBP15.48■□□□□ 0.07
SRPRA-206ENST00000532259 C20orf96Q9NUD7 363 aaPredicted RBP15.48■□□□□ 0.07
SRPRA-206ENST00000532259 TMEM39AQ9NV64 488 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 TBX21Q9UL17 535 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 COL4A6Q14031 1691 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 ZCWPW2A0A1B0GU75 182 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 RTN3O95197 1032 aaPredicted RBP15.48■□□□□ 0.07
SRPRA-206ENST00000532259 EFEMP2O95967 443 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 ITGA2BP08514 1039 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 ELAVL2Q12926 359 aaKnown RBP15.48■□□□□ 0.07
SRPRA-206ENST00000532259 IKBKEQ14164 716 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 IHHQ14623 411 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 USP41Q3LFD5 358 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 AFMIDQ63HM1 303 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 STRA8Q7Z7C7 330 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 CHSY1Q86X52 802 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 ARHGAP18Q8N392 663 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 SLC25A41Q8N5S1 370 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 RFWD2Q8NHY2 731 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 PPM1EQ8WY54 764 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 PSMG2Q969U7 264 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 C1orf74Q96LT6 269 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 VAT1Q99536 393 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 IL12RB2Q99665 862 aa15.48■□□□□ 0.07
SRPRA-206ENST00000532259 BEGAINQ9BUH8 593 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms