RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 CDH15P55291 814 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 EEFSECP57772 596 aaKnown RBP4.78□□□□□ -1.64
USP47-211ENST00000531513 FOXL2P58012 376 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 RPS3AP61247 264 aaKnown RBP4.78□□□□□ -1.64
USP47-211ENST00000531513 TLE3Q04726 772 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 TDGQ13569 410 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 CBFBQ13951 182 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 ZNF260Q3ZCT1 412 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 TREML2Q5T2D2 321 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 RUSC1-AS1Q66K80 236 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 ACSM6Q6P461 480 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 SLC22A25Q6T423 547 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 KLHL24Q6TFL4 600 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 C16orf89Q6UX73 402 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 WDR53Q7Z5U6 358 aaPredicted RBP4.78□□□□□ -1.64
USP47-211ENST00000531513 METTL6Q8TCB7 284 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 WDYHV1Q96HA8 205 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 ASB2Q96Q27 587 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 CD180Q99467 661 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 SLC25A18Q9H1K4 315 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 SYNCQ9H7C4 482 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 BRF2Q9HAW0 419 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 GLOD4Q9HC38 313 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 PDE11AQ9HCR9 933 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 SEMA4BQ9NPR2 832 aaPredicted RBP4.78□□□□□ -1.64
USP47-211ENST00000531513 PDGFCQ9NRA1 345 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 SEPT11Q9NVA2 429 aaKnown RBP4.78□□□□□ -1.64
USP47-211ENST00000531513 BEX4Q9NWD9 120 aaPredicted RBP4.78□□□□□ -1.64
USP47-211ENST00000531513 ZDHHC7Q9NXF8 308 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 TUBA8Q9NY65 449 aaPredicted RBP4.78□□□□□ -1.64
USP47-211ENST00000531513 ADD3Q9UEY8 706 aaKnown RBP4.78□□□□□ -1.64
USP47-211ENST00000531513 CD207Q9UJ71 328 aa4.78□□□□□ -1.64
USP47-211ENST00000531513 GAGE10A6NGK3 116 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 STARD3NLO95772 234 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 ONECUT2O95948 504 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 PEPDP12955 493 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 PORP16435 677 aaPredicted RBP4.77□□□□□ -1.65
USP47-211ENST00000531513 CYP2C18P33260 490 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 HARS2P49590 506 aaKnown RBP4.77□□□□□ -1.65
USP47-211ENST00000531513 POLGP54098 1239 aaPredicted RBP4.77□□□□□ -1.65
USP47-211ENST00000531513 CYP4F2P78329 520 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 CREB5Q02930 508 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 DCTN2Q13561 401 aaKnown RBP4.77□□□□□ -1.65
USP47-211ENST00000531513 DNASE1L3Q13609 305 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 ACVR2BQ13705 512 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 WTAPQ15007 396 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 RABEP1Q15276 862 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 FAM187BQ17R55 369 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 ZNF766Q5HY98 468 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 ADGRG6Q86SQ4 1221 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 CNGA4Q8IV77 575 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 P3H2Q8IVL5 708 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 GALNT16Q8N428 558 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 ETNPPLQ8TBG4 499 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 CLEC4CQ8WTT0 213 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 SH3KBP1Q96B97 665 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 CTHRC1Q96CG8 243 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 ELP4Q96EB1 424 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 TRMT61AQ96FX7 289 aaKnown RBP4.77□□□□□ -1.65
USP47-211ENST00000531513 HMCESQ96FZ2 354 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 MACROD1Q9BQ69 325 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 AP1M1Q9BXS5 423 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 ADGRE3Q9BY15 652 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 MROH8Q9H579 483 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 TLR8Q9NR97 1041 aaKnown RBP4.77□□□□□ -1.65
USP47-211ENST00000531513 ALKBH4Q9NXW9 302 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 ZNF580Q9UK33 172 aa4.77□□□□□ -1.65
USP47-211ENST00000531513 CYP3A7-CYP3A51PA0A087WV96 503 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 hCG_1807616A0A1W2PRN6 198 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 GRM8O00222 908 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 SPRY2O43597 315 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 PMPCBO75439 489 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 DNTTP04053 509 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 CBSLP0DN79 551 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 CREB1P16220 341 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 CYP3A7P24462 503 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 ADRA1DP25100 572 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 GKP32189 559 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 MCM5P33992 734 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 CBSP35520 551 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 RARSP54136 660 aaKnown RBP4.76□□□□□ -1.65
USP47-211ENST00000531513 TAS2R50P59544 299 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 GOLGA8FQ08AF8 430 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 LAMB3Q13751 1172 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 PCID2Q5JVF3 399 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 WDR93Q6P2C0 686 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 KIAA1324Q6UXG2 1013 aaKnown RBP4.76□□□□□ -1.65
USP47-211ENST00000531513 NAPRTQ6XQN6 538 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 CHSY1Q86X52 802 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 TTC39CQ8N584 583 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 NKAIN3Q8N8D7 197 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 PNLDC1Q8NA58 520 aaKnown RBP4.76□□□□□ -1.65
USP47-211ENST00000531513 RFWD2Q8NHY2 731 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 RUFY2Q8WXA3 655 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 R3HDM4Q96D70 268 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 RNFT2Q96EX2 444 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 C5orf34Q96MH7 638 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 NR1H4Q96RI1 486 aaPredicted RBP4.76□□□□□ -1.65
USP47-211ENST00000531513 CLPBQ9H078 707 aa4.76□□□□□ -1.65
USP47-211ENST00000531513 RANBP17Q9H2T7 1088 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms