RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 VTI1BQ9UEU0 232 aa7.33□□□□□ -1.24
TRIM53CP-201ENST00000531490 AJAP1Q9UKB5 411 aaPredicted RBP7.33□□□□□ -1.24
TRIM53CP-201ENST00000531490 PILRBQ9UKJ0 227 aa7.33□□□□□ -1.24
TRIM53CP-201ENST00000531490 MMP17Q9ULZ9 603 aa7.33□□□□□ -1.24
TRIM53CP-201ENST00000531490 PCDHB4Q9Y5E5 795 aa7.33□□□□□ -1.24
TRIM53CP-201ENST00000531490 TRAV19A0A0A6YYK7 116 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 TCRBV21S2A2A0A5A6 115 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 BECN2A8MW95 431 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 LEFTY2O00292 366 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 GFRA2O00451 464 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 COCHO43405 550 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 RTN3O95197 1032 aaPredicted RBP7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 OLFM2O95897 454 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 VDRP11473 427 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 CD19P15391 556 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 TBXAS1P24557 533 aaPredicted RBP7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 DDX6P26196 483 aaKnown RBP eCLIP7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 KIF11P52732 1056 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 ATXN3P54252 364 aaPredicted RBP7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 OXCT1P55809 520 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 GCNT1Q02742 428 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 CETN1Q12798 172 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 ZNF268Q14587 947 aaPredicted RBP7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 ARHGAP44Q17R89 818 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 SNX30Q5VWJ9 437 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 ARHGAP17Q68EM7 881 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 SLC23A3Q6PIS1 610 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 TRIM65Q6PJ69 517 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 CCNI2Q6ZMN8 369 aaPredicted RBP7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 SCD5Q86SK9 330 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 SLCO6A1Q86UG4 719 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 PIGZQ86VD9 579 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 C11orf74Q86VG3 221 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 ADGRG2Q8IZP9 1017 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 MINDY1Q8N5J2 469 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 IL17RCQ8NAC3 791 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 ANKRD52Q8NB46 1076 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 ENOX1Q8TC92 643 aaKnown RBP7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 ATP2A3Q93084 1043 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 SLITRK1Q96PX8 696 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 TUBGCP2Q9BSJ2 902 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 MIR1-1HGQ9H1L0 117 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 NDST4Q9H3R1 872 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 KIF9Q9HAQ2 790 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 SIX2Q9NPC8 291 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 BCCIPQ9P287 314 aaKnown RBP eCLIP7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 TSPAN16Q9UKR8 245 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 NFE2L3Q9Y4A8 694 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 CPQQ9Y646 472 aa7.32□□□□□ -1.24
TRIM53CP-201ENST00000531490 ATP8B3O60423 1300 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 A0A1W2PQH9 124 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 UPK3BL1B0FP48 263 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 KCNJ18B7U540 433 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 UPK3BL2E5RIL1 263 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 O00370 1275 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 MDM4O15151 490 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 OPHN1O60890 802 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 CYP17A1P05093 508 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 FTH1P19P0C7X4 201 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 PNMA6AP0CW24 399 aaPredicted RBP7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 MBL2P11226 248 aaPredicted RBP7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 WASP42768 502 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 PPP3CCP48454 512 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 IRAK1P51617 712 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 SLC7A9P82251 487 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 RPL6Q02878 288 aaKnown RBP7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 KDSRQ06136 332 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 GFPT1Q06210 699 aaPredicted RBP7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 SLBPQ14493 270 aaKnown RBP eCLIP7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 KCNJ12Q14500 433 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 NCAPHQ15003 741 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 TRIP6Q15654 476 aaKnown RBP7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 CNGA2Q16280 664 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 NKG7Q16617 165 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 MAN2A1Q16706 1144 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 EXOC3L4Q17RC7 722 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 GOLGA7BQ2TAP0 167 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 VWA3BQ502W6 1294 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 TCP11X2Q5H9J9 407 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 RAB41Q5JT25 222 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 HECTD3Q5T447 861 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 CCDC183Q5T5S1 534 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 CAVIN1Q6NZI2 390 aaKnown RBP7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 PMF1Q6P1K2 205 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 SASS6Q6UVJ0 657 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 LCLAT1Q6UWP7 414 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 GBP6Q6ZN66 633 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 SLC41A1Q8IVJ1 513 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 TTC39CQ8N584 583 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 RBBP8NLQ8NC74 664 aaPredicted RBP7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 PHC3Q8NDX5 983 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 SLC35F5Q8WV83 523 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 UBXN6Q9BZV1 441 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 VPS16Q9H269 839 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 HSD3B7Q9H2F3 369 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 FBXO44Q9H4M3 255 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 FAM124BQ9H5Z6 455 aaPredicted RBP7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 CAPN10Q9HC96 672 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 CD93Q9NPY3 652 aa7.31□□□□□ -1.24
TRIM53CP-201ENST00000531490 COMMD8Q9NX08 183 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms