RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 TMEM59LQ9UK28 342 aa18.43■□□□□ 0.54
PTPN11-204ENST00000531326 LOC400499M0QZD8 3231 aa18.43■□□□□ 0.54
PTPN11-204ENST00000531326 BAHCC1Q9P281 2608 aa18.42■□□□□ 0.54
PTPN11-204ENST00000531326 IGHV4-34P06331 123 aa18.42■□□□□ 0.54
PTPN11-204ENST00000531326 CD27P26842 260 aa18.42■□□□□ 0.54
PTPN11-204ENST00000531326 CSKP41240 450 aa18.42■□□□□ 0.54
PTPN11-204ENST00000531326 RPS24P62847 133 aaKnown RBP18.42■□□□□ 0.54
PTPN11-204ENST00000531326 PITX1P78337 314 aaPredicted RBP18.42■□□□□ 0.54
PTPN11-204ENST00000531326 COL9A2Q14055 689 aaPredicted RBP18.42■□□□□ 0.54
PTPN11-204ENST00000531326 TEAD4Q15561 434 aa18.42■□□□□ 0.54
PTPN11-204ENST00000531326 TTC31Q49AM3 519 aaPredicted RBP18.42■□□□□ 0.54
PTPN11-204ENST00000531326 FSCBQ5H9T9 825 aa18.42■□□□□ 0.54
PTPN11-204ENST00000531326 TRNP1Q6NT89 227 aa18.42■□□□□ 0.54
PTPN11-204ENST00000531326 HJURPQ8NCD3 748 aaPredicted RBP18.42■□□□□ 0.54
PTPN11-204ENST00000531326 C3orf20Q8ND61 904 aa18.42■□□□□ 0.54
PTPN11-204ENST00000531326 MDM1Q8TC05 714 aa18.42■□□□□ 0.54
PTPN11-204ENST00000531326 MRGPRX3Q96LB0 322 aa18.42■□□□□ 0.54
PTPN11-204ENST00000531326 CDC6Q99741 560 aa18.42■□□□□ 0.54
PTPN11-204ENST00000531326 NHEJ1Q9H9Q4 299 aaPredicted RBP18.42■□□□□ 0.54
PTPN11-204ENST00000531326 SGK2Q9HBY8 427 aa18.42■□□□□ 0.54
PTPN11-204ENST00000531326 METTL5Q9NRN9 209 aaKnown RBP18.42■□□□□ 0.54
PTPN11-204ENST00000531326 SERGEFQ9UGK8 458 aa18.42■□□□□ 0.54
PTPN11-204ENST00000531326 GPSM3Q9Y4H4 160 aa18.42■□□□□ 0.54
PTPN11-204ENST00000531326 H0Y8X5 98 aa18.41■□□□□ 0.54
PTPN11-204ENST00000531326 CAPN9O14815 690 aa18.41■□□□□ 0.54
PTPN11-204ENST00000531326 SIN3BO75182 1162 aa18.41■□□□□ 0.54
PTPN11-204ENST00000531326 GJB6O95452 261 aa18.41■□□□□ 0.54
PTPN11-204ENST00000531326 IGLV3-25P01717 112 aa18.41■□□□□ 0.54
PTPN11-204ENST00000531326 RRM1P23921 792 aa18.41■□□□□ 0.54
PTPN11-204ENST00000531326 FLT3P36888 993 aa18.41■□□□□ 0.54
PTPN11-204ENST00000531326 SLC18A3Q16572 532 aa18.41■□□□□ 0.54
PTPN11-204ENST00000531326 DCAF6Q58WW2 860 aa18.41■□□□□ 0.54
PTPN11-204ENST00000531326 ALKBH5Q6P6C2 394 aaKnown RBP18.41■□□□□ 0.54
PTPN11-204ENST00000531326 ARCQ7LC44 396 aa18.41■□□□□ 0.54
PTPN11-204ENST00000531326 TMPRSS7Q7RTY8 843 aa18.41■□□□□ 0.54
PTPN11-204ENST00000531326 TAC4Q86UU9 113 aa18.41■□□□□ 0.54
PTPN11-204ENST00000531326 MARCH9Q86YJ5 346 aa18.41■□□□□ 0.54
PTPN11-204ENST00000531326 IGSF8Q969P0 613 aa18.41■□□□□ 0.54
PTPN11-204ENST00000531326 SLC39A13Q96H72 371 aa18.41■□□□□ 0.54
PTPN11-204ENST00000531326 PABPC3Q9H361 631 aaKnown RBP18.41■□□□□ 0.54
PTPN11-204ENST00000531326 CCDC86Q9H6F5 360 aaKnown RBP18.41■□□□□ 0.54
PTPN11-204ENST00000531326 XPO7Q9UIA9 1087 aaKnown RBP18.41■□□□□ 0.54
PTPN11-204ENST00000531326 NYNRINQ9P2P1 1898 aaKnown RBP18.4■□□□□ 0.54
PTPN11-204ENST00000531326 GOLGA8CPA6NN73 597 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 ATMINO43313 823 aaPredicted RBP18.4■□□□□ 0.54
PTPN11-204ENST00000531326 NOS2P35228 1153 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 CTSOP43234 321 aaPredicted RBP18.4■□□□□ 0.54
PTPN11-204ENST00000531326 CTSKP43235 329 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 RNASE9P60153 205 aaKnown RBP18.4■□□□□ 0.54
PTPN11-204ENST00000531326 EIF4EBP2Q13542 120 aaPredicted RBP18.4■□□□□ 0.54
PTPN11-204ENST00000531326 SUZ12Q15022 739 aaKnown RBP18.4■□□□□ 0.54
PTPN11-204ENST00000531326 HNRNPA1L2Q32P51 320 aaKnown RBP18.4■□□□□ 0.54
PTPN11-204ENST00000531326 MS4A13Q5J8X5 152 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 PPP1R15BQ5SWA1 713 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 CCDC122Q5T0U0 273 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 OTUD1Q5VV17 481 aaPredicted RBP18.4■□□□□ 0.54
PTPN11-204ENST00000531326 KIAA0895LQ68EN5 471 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 USP30Q70CQ3 517 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 CFAP52Q8N1V2 620 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 CARNMT1Q8N4J0 409 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 ZNF557Q8N988 423 aaPredicted RBP18.4■□□□□ 0.54
PTPN11-204ENST00000531326 JOSD2Q8TAC2 188 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 ADAM32Q8TC27 787 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 CCDC42Q96M95 316 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 DEF6Q9H4E7 631 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 EBF2Q9HAK2 575 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 FBXL12Q9NXK8 326 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.4■□□□□ 0.54
PTPN11-204ENST00000531326 TLR6Q9Y2C9 796 aa18.4■□□□□ 0.54
PTPN11-204ENST00000531326 APC2O95996 2303 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 SIGLEC16A6NMB1 481 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 C10orf142B7Z368 130 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 AKR1B10O60218 316 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 PCDHGA12O60330 932 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 TRUB2O95900 331 aaKnown RBP18.39■□□□□ 0.53
PTPN11-204ENST00000531326 ASLP04424 464 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 CCT8P50990 548 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 GALCP54803 685 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 ST8SIA6P61647 398 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 NNTQ13423 1086 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 PITRM1Q5JRX3 1037 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 C9orf64Q5T6V5 341 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 PLEKHA7Q6IQ23 1121 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 DNAJC24Q6P3W2 148 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 C19orf48Q6RUI8 117 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 EMC1Q8N766 993 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 NT5C3BQ969T7 300 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 SERPINB11Q96P15 392 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 NPY6RQ99463 290 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 SELENOOQ9BVL4 669 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 SPTLC3Q9NUV7 552 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 SCML1Q9UN30 329 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 ERVW-1Q9UQF0 538 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 ACACAQ13085 2346 aa18.39■□□□□ 0.53
PTPN11-204ENST00000531326 A0A1W2PP55 124 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 A0A1W2PPC4 97 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 FAM47DPA6NHR8 397 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 C2CD4BA6NLJ0 364 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 TTC34A8MYJ7 566 aa18.38■□□□□ 0.53
PTPN11-204ENST00000531326 MID1O15344 667 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms