RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 UGT2B11O75310 529 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 TSPY3P0CV98 308 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 TSPY8P0CW00 308 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 HSPA1AP0DMV8 641 aaKnown RBP8.27□□□□□ -1.08
CSDE1-214ENST00000530886 HSPA1BP0DMV9 641 aaKnown RBP8.27□□□□□ -1.08
CSDE1-214ENST00000530886 NCF2P19878 526 aaPredicted RBP8.27□□□□□ -1.08
CSDE1-214ENST00000530886 CD40LGP29965 261 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 PRKAA2P54646 552 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 IGBP1P78318 339 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 NAB1Q13506 487 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 CEP55Q53EZ4 464 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 SPOCD1Q6ZMY3 1216 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 SLC22A16Q86VW1 577 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 ZSWIM2Q8NEG5 633 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 LILRB1Q8NHL6 650 aaPredicted RBP8.27□□□□□ -1.08
CSDE1-214ENST00000530886 DCPSQ96C86 337 aaKnown RBP8.27□□□□□ -1.08
CSDE1-214ENST00000530886 VPS35Q96QK1 796 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 GDF15Q99988 308 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 HSD17B14Q9BPX1 270 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 WDR41Q9HAD4 459 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 ATP13A2Q9NQ11 1180 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 RAB20Q9NX57 234 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 PKD2L2Q9NZM6 624 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 EMCNQ9ULC0 261 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 CDY2AQ9Y6F7 541 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 CDY1Q9Y6F8 540 aa8.27□□□□□ -1.08
CSDE1-214ENST00000530886 HMX2A2RU54 273 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 C3orf70A6NLC5 250 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-214ENST00000530886 GOLGA8SH3BPF8 625 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 AURKAO14965 403 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 BET1O15155 118 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 ZW10O43264 779 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 ZMPSTE24O75844 475 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 TOMM70O94826 608 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 ITGBL1O95965 494 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-214ENST00000530886 CD1EP15812 388 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 EEF1DP29692 281 aaKnown RBP8.27□□□□□ -1.09
CSDE1-214ENST00000530886 ABCE1P61221 599 aaKnown RBP8.27□□□□□ -1.09
CSDE1-214ENST00000530886 B2MP61769 119 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 COPZ1P61923 177 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 DNASE1L3Q13609 305 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 PCLAFQ15004 111 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 CCNYL2Q5T2Q4 361 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 SLFN13Q68D06 897 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 XAF1Q6GPH4 301 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 ERMP1Q7Z2K6 904 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 SPRED1Q7Z699 444 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 CTAGE3PQ8IX95 158 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 SLC2A14Q8TDB8 520 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 ERLEC1Q96DZ1 483 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 CIB1Q99828 191 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 MRPL47Q9HD33 250 aaKnown RBP8.27□□□□□ -1.09
CSDE1-214ENST00000530886 TOPORSQ9NS56 1045 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-214ENST00000530886 MOSPD1Q9UJG1 213 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 COQ4Q9Y3A0 265 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 PCDHB12Q9Y5F1 795 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 FNDC1Q4ZHG4 1894 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-214ENST00000530886 TCRBV5S1A1TA0A578 114 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 UNCXA6NJT0 531 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 SGK1O00141 431 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 ENPP3O14638 875 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 SNPHO15079 494 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 MTSS1O43312 755 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 LYPLA1O75608 230 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-214ENST00000530886 PIAS1O75925 651 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 PTTG1O95997 202 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 CD58P19256 250 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 GSTM2P28161 218 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 ARRB2P32121 409 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 RPL22P35268 128 aaKnown RBP8.27□□□□□ -1.09
CSDE1-214ENST00000530886 CNTN2Q02246 1040 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 GALNT3Q14435 633 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 PCSK7Q16549 785 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 BBS9Q3SYG4 887 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.27□□□□□ -1.09
CSDE1-214ENST00000530886 RSBN1LQ6PCB5 846 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-214ENST00000530886 UNC5AQ6ZN44 842 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 SLC16A12Q6ZSM3 486 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 CYS1Q717R9 158 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 TXNRD3Q86VQ6 643 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 DAW1Q8N136 415 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 PHF10Q8WUB8 498 aaKnown RBP8.27□□□□□ -1.09
CSDE1-214ENST00000530886 SEMA4DQ92854 862 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 HDAC11Q96DB2 347 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 CFAP36Q96G28 342 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 PNPOQ9NVS9 261 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 MTRRQ9UBK8 725 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 CNOT6Q9ULM6 557 aaKnown RBP8.27□□□□□ -1.09
CSDE1-214ENST00000530886 SPEF1Q9Y4P9 236 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 PCDHGA8Q9Y5G5 932 aa8.27□□□□□ -1.09
CSDE1-214ENST00000530886 SNTNA6NMZ2 147 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 TAF4O00268 1085 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 AIM2O14862 343 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 TRIM24O15164 1050 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 ABCB7O75027 752 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 GLRA3O75311 464 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 TOM1L1O75674 476 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 STARD3NLO95772 234 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 GNAO1P09471 354 aa8.26□□□□□ -1.09
CSDE1-214ENST00000530886 KRT10P13645 584 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms