RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 ESYT3A0FGR9 886 aa10.89□□□□□ -0.67
SOX6-213ENST00000530378 ARHGAP42A6NI28 874 aa10.89□□□□□ -0.67
SOX6-213ENST00000530378 CTSOP43234 321 aaPredicted RBP10.89□□□□□ -0.67
SOX6-213ENST00000530378 NDST2P52849 883 aa10.89□□□□□ -0.67
SOX6-213ENST00000530378 ZBTB17Q13105 803 aa10.89□□□□□ -0.67
SOX6-213ENST00000530378 RUNX3Q13761 415 aa10.89□□□□□ -0.67
SOX6-213ENST00000530378 PRKD1Q15139 912 aaPredicted RBP10.89□□□□□ -0.67
SOX6-213ENST00000530378 PDGFRLQ15198 375 aa10.89□□□□□ -0.67
SOX6-213ENST00000530378 PPP1R7Q15435 360 aa10.89□□□□□ -0.67
SOX6-213ENST00000530378 SYCP2LQ5T4T6 812 aa10.89□□□□□ -0.67
SOX6-213ENST00000530378 HEATR6Q6AI08 1181 aaKnown RBP10.89□□□□□ -0.67
SOX6-213ENST00000530378 CPA6Q8N4T0 437 aa10.89□□□□□ -0.67
SOX6-213ENST00000530378 ZNF419Q96HQ0 510 aaPredicted RBP10.89□□□□□ -0.67
SOX6-213ENST00000530378 TBC1D30Q9Y2I9 924 aa10.89□□□□□ -0.67
SOX6-213ENST00000530378 FARP1Q9Y4F1 1045 aaPredicted RBP10.89□□□□□ -0.67
SOX6-213ENST00000530378 RNF103O00237 685 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 CHADO15335 359 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 TULP3O75386 442 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 ECEL1O95672 775 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 MX2P20592 715 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 PTGIRP43119 386 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 FNTAP49354 379 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 CLCN6P51797 869 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 OXCT1P55809 520 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 GAD2Q05329 585 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 PPIDQ08752 370 aaKnown RBP10.88□□□□□ -0.67
SOX6-213ENST00000530378 SERINC3Q13530 473 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 GAB4Q2WGN9 574 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 PARP15Q460N3 678 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 FUT11Q495W5 492 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 IER5LQ5T953 404 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 FAXCQ5TGI0 409 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 SETD3Q86TU7 594 aaPredicted RBP10.88□□□□□ -0.67
SOX6-213ENST00000530378 JAMLQ86YT9 394 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 CCDC13Q8IYE1 715 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 LZTR1Q8N653 840 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 ALLCQ8N6M5 410 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 CCDC89Q8N998 374 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 CCDC110Q8TBZ0 833 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 HTR3CQ8WXA8 447 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 SORCS1Q8WY21 1168 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 NKD2Q969F2 451 aaPredicted RBP10.88□□□□□ -0.67
SOX6-213ENST00000530378 ERLEC1Q96DZ1 483 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 FEM1AQ9BSK4 669 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 DPH5Q9H2P9 285 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 ZDHHC4Q9NPG8 344 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 MARK1Q9P0L2 795 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 THEGQ9P2T0 379 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 GGA2Q9UJY4 613 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 INTS6Q9UL03 887 aaKnown RBP10.88□□□□□ -0.67
SOX6-213ENST00000530378 ILVBLA1L0T0 632 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 ANTXRLA6NF34 631 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 ARNTLO00327 626 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 CACNG3O60359 315 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 MAFKO60675 156 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 KRT14P02533 472 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 ITGAVP06756 1048 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 PABPC1P11940 636 aaKnown RBP10.88□□□□□ -0.67
SOX6-213ENST00000530378 GJA4P35212 333 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 PLA2G5P39877 138 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 DGKGP49619 791 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 STK19P49842 368 aaPredicted RBP10.88□□□□□ -0.67
SOX6-213ENST00000530378 GEN1Q17RS7 908 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 PLEKHG6Q3KR16 790 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 ITPRIPL2Q3MIP1 535 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 PITRM1Q5JRX3 1037 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 MPP7Q5T2T1 576 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 RNF135Q8IUD6 432 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 MMGT1Q8N4V1 131 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 FIBINQ8TAL6 211 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 CSGALNACT1Q8TDX6 532 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 HDAC11Q96DB2 347 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 CHFRQ96EP1 664 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 EXOC2Q96KP1 924 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 RPL10LQ96L21 214 aaKnown RBP10.88□□□□□ -0.67
SOX6-213ENST00000530378 AGAP3Q96P47 875 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 PRDM16Q9HAZ2 1276 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 HOMER3Q9NSC5 361 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 ASIC3Q9UHC3 531 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 VPS51Q9UID3 782 aa10.88□□□□□ -0.67
SOX6-213ENST00000530378 ANKRD36A6QL64 1941 aa10.87□□□□□ -0.67
SOX6-213ENST00000530378 TTC24A2A3L6 582 aaPredicted RBP10.87□□□□□ -0.67
SOX6-213ENST00000530378 HOXC11O43248 304 aaPredicted RBP10.87□□□□□ -0.67
SOX6-213ENST00000530378 GJB3O75712 270 aa10.87□□□□□ -0.67
SOX6-213ENST00000530378 HEXIM1O94992 359 aaKnown RBP10.87□□□□□ -0.67
SOX6-213ENST00000530378 JCHAINP01591 159 aa10.87□□□□□ -0.67
SOX6-213ENST00000530378 ARF5P84085 180 aa10.87□□□□□ -0.67
SOX6-213ENST00000530378 SLC10A7Q0GE19 358 aa10.87□□□□□ -0.67
SOX6-213ENST00000530378 WASHC5Q12768 1159 aa10.87□□□□□ -0.67
SOX6-213ENST00000530378 XRCC4Q13426 336 aa10.87□□□□□ -0.67
SOX6-213ENST00000530378 TRADDQ15628 312 aa10.87□□□□□ -0.67
SOX6-213ENST00000530378 ERCC6LQ2NKX8 1250 aa10.87□□□□□ -0.67
SOX6-213ENST00000530378 BZW1Q7L1Q6 419 aaKnown RBP10.87□□□□□ -0.67
SOX6-213ENST00000530378 SLC44A3Q8N4M1 653 aa10.87□□□□□ -0.67
SOX6-213ENST00000530378 ATL2Q8NHH9 583 aa10.87□□□□□ -0.67
SOX6-213ENST00000530378 CYB5D2Q8WUJ1 264 aa10.87□□□□□ -0.67
SOX6-213ENST00000530378 NXPE3Q969Y0 559 aa10.87□□□□□ -0.67
SOX6-213ENST00000530378 XPO6Q96QU8 1125 aaKnown RBP10.87□□□□□ -0.67
SOX6-213ENST00000530378 CIPCQ9C0C6 399 aa10.87□□□□□ -0.67
SOX6-213ENST00000530378 MAGEH1Q9H213 219 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms