RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 TRIM2Q9C040 744 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 FOXP1Q9H334 677 aaPredicted RBP5.02□□□□□ -1.61
C11orf88-204ENST00000529661 STN1Q9H668 368 aaKnown RBP5.02□□□□□ -1.61
C11orf88-204ENST00000529661 ACAD9Q9H845 621 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 TMEM45AQ9NWC5 275 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 HEY2Q9UBP5 337 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 CNOT7Q9UIV1 285 aaKnown RBP5.02□□□□□ -1.61
C11orf88-204ENST00000529661 HSF4Q9ULV5 492 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 ARHGAP26Q9UNA1 814 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 GDAQ9Y2T3 454 aa5.02□□□□□ -1.61
C11orf88-204ENST00000529661 FAM90A7PA6NKC0 464 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 FAM90A22PA8MWA6 464 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 FAM90A12PA8MX19 464 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 FAM90A23PA8MXZ1 464 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 ANP32CO43423 234 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 GUCY1B2O75343 617 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 TULP3O75386 442 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 TMEM63AO94886 807 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 TBX18O95935 607 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 TMEM191BP0C7N4 346 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 STAT6P42226 847 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 ZNF84P51523 738 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 MVDP53602 400 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 PRICKLE4Q2TBC4 344 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 EARS2Q5JPH6 523 aaKnown RBP5.01□□□□□ -1.61
C11orf88-204ENST00000529661 DEF8Q6ZN54 512 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 TECPR1Q7Z6L1 1165 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 RFX6Q8HWS3 928 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 NME8Q8N427 588 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 EXD3Q8N9H8 876 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 TBC1D22AQ8WUA7 517 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 IGFBPL1Q8WX77 278 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 ZNF845Q96IR2 970 aaPredicted RBP5.01□□□□□ -1.61
C11orf88-204ENST00000529661 C7orf26Q96N11 449 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 SFXN1Q9H9B4 322 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 TLR8Q9NR97 1041 aaKnown RBP5.01□□□□□ -1.61
C11orf88-204ENST00000529661 THAP1Q9NVV9 213 aa5.01□□□□□ -1.61
C11orf88-204ENST00000529661 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5□□□□□ -1.61
C11orf88-204ENST00000529661 SH2D7A6NKC9 451 aaPredicted RBP5□□□□□ -1.61
C11orf88-204ENST00000529661 ARSAP15289 507 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 ABCD3P28288 659 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 AVPR2P30518 371 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 SLC12A2P55011 1212 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 SLC37A1P57057 533 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 GALNT2Q10471 571 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 ALKBH1Q13686 389 aaKnown RBP5□□□□□ -1.61
C11orf88-204ENST00000529661 LAMB3Q13751 1172 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 GPATCH4Q5T3I0 446 aaKnown RBP5□□□□□ -1.61
C11orf88-204ENST00000529661 AWAT2Q6E213 333 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 DHRS13Q6UX07 377 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 FAM57BQ71RH2 274 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 UBE2Q1Q7Z7E8 422 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 ARMC8Q8IUR7 673 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 ADGRF4Q8IZF3 695 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 ENDOVQ8N8Q3 282 aaKnown RBP5□□□□□ -1.61
C11orf88-204ENST00000529661 ZNF548Q8NEK5 533 aaPredicted RBP5□□□□□ -1.61
C11orf88-204ENST00000529661 ZCCHC10Q8TBK6 192 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 CENPIQ92674 756 aaPredicted RBP5□□□□□ -1.61
C11orf88-204ENST00000529661 SH3KBP1Q96B97 665 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 P2RY11Q96G91 374 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 HTATIP2Q9BUP3 242 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 OLA1Q9NTK5 396 aaKnown RBP5□□□□□ -1.61
C11orf88-204ENST00000529661 TBC1D22BQ9NU19 505 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 BLOC1S4Q9NUP1 217 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 SLC25A10Q9UBX3 287 aaPredicted RBP5□□□□□ -1.61
C11orf88-204ENST00000529661 AASSQ9UDR5 926 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 KLQ9UEF7 1012 aa5□□□□□ -1.61
C11orf88-204ENST00000529661 SPATA31A5Q5VU36 1347 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 SPATA31A7Q8IWB4 1347 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 LY6G6EA0A0G2JKS1 128 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 PEX12O00623 359 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 SPTLC2O15270 562 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 UGDHO60701 494 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 CNOT3O75175 753 aaKnown RBP4.99□□□□□ -1.61
C11orf88-204ENST00000529661 METTL18O95568 372 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 WEE2P0C1S8 567 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 RFPL3SP0C7P2 107 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 HOXB9P17482 250 aaPredicted RBP4.99□□□□□ -1.61
C11orf88-204ENST00000529661 TFEBP19484 476 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 PRPH2P23942 346 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 ME1P48163 572 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 SOX2P48431 317 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 FOXD4Q12950 439 aaPredicted RBP4.99□□□□□ -1.61
C11orf88-204ENST00000529661 MTX1Q13505 466 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 GPR68Q15743 365 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 NFIL3Q16649 462 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 ANXA2RQ3ZCQ2 193 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 GLE1Q53GS7 698 aaKnown RBP4.99□□□□□ -1.61
C11orf88-204ENST00000529661 CFAP161Q6P656 301 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 C4orf50Q6ZRC1 276 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 IRF2BP2Q7Z5L9 587 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 TICAM2Q86XR7 235 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 RHPN2Q8IUC4 686 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 ADGRF3Q8IZF5 1079 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 ADPRHL1Q8NDY3 354 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 TDRD7Q8NHU6 1098 aaKnown RBP4.99□□□□□ -1.61
C11orf88-204ENST00000529661 UCMAQ8WVF2 138 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 KAT2BQ92831 832 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 RNFT2Q96EX2 444 aa4.99□□□□□ -1.61
C11orf88-204ENST00000529661 GPR78Q96P69 363 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms