RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ANO10Q9NW15 660 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 FANCLQ9NW38 375 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 MARK1Q9P0L2 795 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 MARCH2Q9P0N8 246 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 RASAL2Q9UJF2 1139 aa8.8□□□□□ -1
SSBP3-212ENST00000528930 LSM7Q9UK45 103 aaKnown RBP8.8□□□□□ -1
SSBP3-212ENST00000528930 ARID1BQ8NFD5 2236 aaPredicted RBP8.79□□□□□ -1
SSBP3-212ENST00000528930 IGHV1OR15-9A0A0B4J2B8 117 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 A0A1B0GTW7 788 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 SLC12A8A0AV02 714 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 TRIM24O15164 1050 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 THAP12O43422 761 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 MED7O43513 233 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 TULP3O75386 442 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 KAT7O95251 611 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 FYNP06241 537 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 HMBSP08397 361 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 PNMA6AP0CW24 399 aaPredicted RBP8.79□□□□□ -1
SSBP3-212ENST00000528930 USP8P40818 1118 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 GRIA2P42262 883 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 GRK6P43250 576 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 MRPS21P82921 87 aaKnown RBP8.79□□□□□ -1
SSBP3-212ENST00000528930 GOLGA8FQ08AF8 430 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 GOLGA8DPQ0D2H9 430 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 KRT31Q15323 416 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 TRIP4Q15650 581 aaPredicted RBP8.79□□□□□ -1
SSBP3-212ENST00000528930 STX1AQ16623 288 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 ANO4Q32M45 955 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 HSF5Q4G112 596 aaPredicted RBP8.79□□□□□ -1
SSBP3-212ENST00000528930 KLHDC7AQ5VTJ3 777 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 MSANTD2Q6P1R3 559 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 IL27RAQ6UWB1 636 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 TPGS1Q6ZTW0 290 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 RSRC2Q7L4I2 434 aaKnown RBP8.79□□□□□ -1
SSBP3-212ENST00000528930 TMEM110Q86TL2 294 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 FAM71AQ8IYT1 594 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 HMGB4Q8WW32 186 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 GTPBP3Q969Y2 492 aaKnown RBP8.79□□□□□ -1
SSBP3-212ENST00000528930 MIS12Q9H081 205 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 VPS16Q9H269 839 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 HSD3B7Q9H2F3 369 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 ARHGEF4Q9NR80 690 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 OLA1Q9NTK5 396 aaKnown RBP8.79□□□□□ -1
SSBP3-212ENST00000528930 TAB2Q9NYJ8 693 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 BCCIPQ9P287 314 aaKnown RBP eCLIP8.79□□□□□ -1
SSBP3-212ENST00000528930 SFMBT1Q9UHJ3 866 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 FBXO10Q9UK96 956 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 AGO1Q9UL18 857 aaKnown RBP8.79□□□□□ -1
SSBP3-212ENST00000528930 HCN2Q9UL51 889 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 ZNF510Q9Y2H8 683 aa8.79□□□□□ -1
SSBP3-212ENST00000528930 PDZD2O15018 2839 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 LRRC10BA6NIK2 292 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.78□□□□□ -1
SSBP3-212ENST00000528930 NEDD8-MDP1E9PL57 170 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 SGK1O00141 431 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 GFRA2O00451 464 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 KLK10O43240 276 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 PAPSS1O43252 624 aaPredicted RBP8.78□□□□□ -1
SSBP3-212ENST00000528930 CACNG3O60359 315 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 FBXO21O94952 628 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 PENKP01210 267 aaPredicted RBP8.78□□□□□ -1
SSBP3-212ENST00000528930 LTFP02788 710 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 PROCP04070 461 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 APODP05090 189 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 C1SP09871 688 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 CISD3P0C7P0 127 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 TYRP14679 529 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 CORO1AP31146 461 aaKnown RBP8.78□□□□□ -1
SSBP3-212ENST00000528930 TNFRSF4P43489 277 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 KIR2DL1P43626 348 aaPredicted RBP8.78□□□□□ -1
SSBP3-212ENST00000528930 ACADSBP45954 432 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 SEC13P55735 322 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 KDSRQ06136 332 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 TYRO3Q06418 890 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 DRAP1Q14919 205 aaPredicted RBP8.78□□□□□ -1
SSBP3-212ENST00000528930 HLA-BQ31612 363 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 EMC10Q5UCC4 262 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 FYB2Q5VWT5 728 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 APTXQ7Z2E3 356 aaKnown RBP8.78□□□□□ -1
SSBP3-212ENST00000528930 SLC47A2Q86VL8 602 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 DENND1CQ8IV53 801 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 FAM217AQ8IXS0 508 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 CPXM2Q8N436 756 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 BEND7Q8N7W2 519 aaPredicted RBP8.78□□□□□ -1
SSBP3-212ENST00000528930 IL17RCQ8NAC3 791 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 RNF139Q8WU17 664 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 DNASE2BQ8WZ79 361 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 PLD4Q96BZ4 506 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 BBS2Q9BXC9 721 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 DCLK3Q9C098 648 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 EPN3Q9H201 632 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 LHX5Q9H2C1 402 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 PLCB1Q9NQ66 1216 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 ST7Q9NRC1 585 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 WDR35Q9P2L0 1181 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 DEC1Q9P2X7 70 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 TJP2Q9UDY2 1190 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 STOML2Q9UJZ1 356 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 STRIP2Q9ULQ0 834 aa8.78□□□□□ -1
SSBP3-212ENST00000528930 HBS1LQ9Y450 684 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms