RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 TFAP2CQ92754 450 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 SIGLEC10Q96LC7 697 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 GATA5Q9BWX5 397 aaPredicted RBP12.71□□□□□ -0.37
TSKU-203ENST00000527881 OSBPL10Q9BXB5 764 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 HMG20AQ9NP66 347 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 MRPL40Q9NQ50 206 aaKnown RBP12.71□□□□□ -0.37
TSKU-203ENST00000527881 POLE4Q9NR33 117 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 CCDC167Q9P0B6 97 aa12.71□□□□□ -0.37
TSKU-203ENST00000527881 H0YJX3 145 aa12.71□□□□□ -0.38
TSKU-203ENST00000527881 NRP1O14786 923 aa12.71□□□□□ -0.38
TSKU-203ENST00000527881 APOL1O14791 398 aa12.71□□□□□ -0.38
TSKU-203ENST00000527881 EXTL3O43909 919 aa12.71□□□□□ -0.38
TSKU-203ENST00000527881 GH2P01242 217 aa12.71□□□□□ -0.38
TSKU-203ENST00000527881 ITGB5P18084 799 aa12.71□□□□□ -0.38
TSKU-203ENST00000527881 DCKP27707 260 aa12.71□□□□□ -0.38
TSKU-203ENST00000527881 NAGLUP54802 743 aa12.71□□□□□ -0.38
TSKU-203ENST00000527881 MERTKQ12866 999 aa12.71□□□□□ -0.38
TSKU-203ENST00000527881 PTPN20Q4JDL3 420 aa12.71□□□□□ -0.38
TSKU-203ENST00000527881 FAM102AQ5T9C2 384 aaPredicted RBP12.71□□□□□ -0.38
TSKU-203ENST00000527881 DENND1BQ6P3S1 775 aa12.71□□□□□ -0.38
TSKU-203ENST00000527881 OR5B17Q8NGF7 314 aa12.71□□□□□ -0.38
TSKU-203ENST00000527881 FNIP1Q8TF40 1166 aa12.71□□□□□ -0.38
TSKU-203ENST00000527881 CAB39LQ9H9S4 337 aa12.71□□□□□ -0.38
TSKU-203ENST00000527881 SNX15Q9NRS6 342 aa12.71□□□□□ -0.38
TSKU-203ENST00000527881 SPO11Q9Y5K1 396 aa12.71□□□□□ -0.38
TSKU-203ENST00000527881 PHGDHO43175 533 aaKnown RBP12.7□□□□□ -0.38
TSKU-203ENST00000527881 DYNC1LI2O43237 492 aaPredicted RBP12.7□□□□□ -0.38
TSKU-203ENST00000527881 METTL18O95568 372 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 LTFP02788 710 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 C4BPAP04003 597 aaKnown RBP12.7□□□□□ -0.38
TSKU-203ENST00000527881 SLC7A1P30825 629 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 ARL13BQ3SXY8 428 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 NHSL2Q5HYW2 709 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 CDC42EP5Q6NZY7 148 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 PLD6Q8N2A8 252 aaKnown RBP12.7□□□□□ -0.38
TSKU-203ENST00000527881 NAT16Q8N8M0 369 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 TANKQ92844 425 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 OTUD5Q96G74 571 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 ADPGKQ9BRR6 497 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 SDCBP2Q9H190 292 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 GTSE1Q9NYZ3 720 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 PTBP2Q9UKA9 531 aaKnown RBP12.7□□□□□ -0.38
TSKU-203ENST00000527881 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.7□□□□□ -0.38
TSKU-203ENST00000527881 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.7□□□□□ -0.38
TSKU-203ENST00000527881 TMEM114B3SHH9 223 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 GPC4O75487 556 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 LSM8O95777 96 aaKnown RBP12.7□□□□□ -0.38
TSKU-203ENST00000527881 HDCP19113 662 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 GTF2A2P52657 109 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 ZNF846Q147U1 533 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 DLG2Q15700 870 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 AGKQ53H12 422 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 TIFABQ6ZNK6 161 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 BRINP3Q76B58 766 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 TAS2R42Q7RTR8 314 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 ZBTB45Q96K62 511 aaPredicted RBP12.7□□□□□ -0.38
TSKU-203ENST00000527881 SPATA17Q96L03 361 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 TASP1Q9H6P5 420 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 CISHQ9NSE2 258 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 RIC8BQ9NVN3 520 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 DUS2Q9NX74 493 aaKnown RBP12.7□□□□□ -0.38
TSKU-203ENST00000527881 MRPL11Q9Y3B7 192 aaKnown RBP12.7□□□□□ -0.38
TSKU-203ENST00000527881 SLC30A1Q9Y6M5 507 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 A0A096LPK6 155 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 C9IYK1 514 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 INHBBP09529 407 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 TFEBP19484 476 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 MGAT1P26572 445 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 GABRB3P28472 473 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 HPCAL1P37235 193 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 STILQ15468 1287 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 ARL13AQ5H913 290 aaPredicted RBP12.7□□□□□ -0.38
TSKU-203ENST00000527881 SH3PXD2AQ5TCZ1 1133 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 CLIP4Q8N3C7 705 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 DHRSXQ8N5I4 330 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 NIPA2Q8N8Q9 360 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 FBXL18Q96ME1 805 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 GLT1D1Q96MS3 346 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 ALPK1Q96QP1 1244 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 MSTO1Q9BUK6 570 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 DGCR6LQ9BY27 220 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 ST6GALNAC4Q9H4F1 302 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 ASNSD1Q9NWL6 643 aa12.7□□□□□ -0.38
TSKU-203ENST00000527881 NHSQ6T4R5 1651 aa12.69□□□□□ -0.38
TSKU-203ENST00000527881 MATN1P21941 496 aa12.69□□□□□ -0.38
TSKU-203ENST00000527881 TMC5Q6UXY8 1006 aa12.69□□□□□ -0.38
TSKU-203ENST00000527881 PIWIL3Q7Z3Z3 882 aaKnown RBP12.69□□□□□ -0.38
TSKU-203ENST00000527881 ZCCHC7Q8N3Z6 543 aaKnown RBP12.69□□□□□ -0.38
TSKU-203ENST00000527881 DCLK2Q8N568 766 aa12.69□□□□□ -0.38
TSKU-203ENST00000527881 TFAP2BQ92481 460 aa12.69□□□□□ -0.38
TSKU-203ENST00000527881 SLC39A3Q9BRY0 314 aa12.69□□□□□ -0.38
TSKU-203ENST00000527881 SEPT10Q9P0V9 454 aa12.69□□□□□ -0.38
TSKU-203ENST00000527881 COPG1Q9Y678 874 aaKnown RBP12.69□□□□□ -0.38
TSKU-203ENST00000527881 LRRIQ4A6NIV6 560 aa12.69□□□□□ -0.38
TSKU-203ENST00000527881 TRUB2O95900 331 aaKnown RBP12.69□□□□□ -0.38
TSKU-203ENST00000527881 MT-CO1P00395 513 aa12.69□□□□□ -0.38
TSKU-203ENST00000527881 GARTP22102 1010 aa12.69□□□□□ -0.38
TSKU-203ENST00000527881 IL10P22301 178 aa12.69□□□□□ -0.38
TSKU-203ENST00000527881 TM4SF1P30408 202 aa12.69□□□□□ -0.38
TSKU-203ENST00000527881 IDUAP35475 653 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms