RNA–Protein interactions for RNA: ENST00000527821.2

SSH3-205, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-205ENST00000527821 MAN1A1P33908 653 aa16.92■□□□□ 0.3
SSH3-205ENST00000527821 ACVRL1P37023 503 aa16.92■□□□□ 0.3
SSH3-205ENST00000527821 VASPP50552 380 aaPredicted RBP16.92■□□□□ 0.3
SSH3-205ENST00000527821 BYSLQ13895 437 aaKnown RBP16.92■□□□□ 0.3
SSH3-205ENST00000527821 KRT81Q14533 505 aa16.92■□□□□ 0.3
SSH3-205ENST00000527821 TCEAL1Q15170 157 aa16.92■□□□□ 0.3
SSH3-205ENST00000527821 LPAL2Q16609 132 aa16.92■□□□□ 0.3
SSH3-205ENST00000527821 RETSATQ6NUM9 610 aa16.92■□□□□ 0.3
SSH3-205ENST00000527821 LINGO4Q6UY18 593 aa16.92■□□□□ 0.3
SSH3-205ENST00000527821 CACUL1Q86Y37 369 aa16.92■□□□□ 0.3
SSH3-205ENST00000527821 TMEM139Q8IV31 216 aa16.92■□□□□ 0.3
SSH3-205ENST00000527821 SH2D3CQ8N5H7 860 aa16.92■□□□□ 0.3
SSH3-205ENST00000527821 FBRSQ9HAH7 460 aa16.92■□□□□ 0.3
SSH3-205ENST00000527821 CWC15Q9P013 229 aaKnown RBP16.92■□□□□ 0.3
SSH3-205ENST00000527821 TFR2Q9UP52 801 aa16.92■□□□□ 0.3
SSH3-205ENST00000527821 SMG5Q9UPR3 1016 aaKnown RBP16.92■□□□□ 0.3
SSH3-205ENST00000527821 HS3ST2Q9Y278 367 aa16.92■□□□□ 0.3
SSH3-205ENST00000527821 ATP9BO43861 1147 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 ZNF217O75362 1048 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 MT-CO1P00395 513 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 KRT7P08729 469 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 ACADMP11310 421 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 SRCP12931 536 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 ERCC2P18074 760 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 P2RY2P41231 377 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 HCAR3P49019 387 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 CDH6P55285 790 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 YBEYP58557 167 aaPredicted RBP16.91■□□□□ 0.3
SSH3-205ENST00000527821 TAS2R40P59535 323 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 DLG2Q15700 870 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 ZFYVE27Q5T4F4 411 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 C9orf64Q5T6V5 341 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 ACRBPQ8NEB7 543 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 FRS2Q8WU20 508 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 PTPRN2Q92932 1015 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 ACE2Q9BYF1 805 aaPredicted RBP16.91■□□□□ 0.3
SSH3-205ENST00000527821 PCDH18Q9HCL0 1135 aa16.91■□□□□ 0.3
SSH3-205ENST00000527821 CHD5Q8TDI0 1954 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 K7ERQ8 282 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 MAP3K13O43283 966 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 BNIP3LO60238 219 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 RNASEH1O60930 286 aaKnown RBP16.9■□□□□ 0.3
SSH3-205ENST00000527821 ZMPSTE24O75844 475 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 VAV1P15498 845 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 ARF5P84085 180 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 SLC20A2Q08357 652 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 MAP7D1Q3KQU3 841 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 PARP15Q460N3 678 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 ATP13A4Q4VNC1 1196 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 ZNF776Q68DI1 518 aaPredicted RBP16.9■□□□□ 0.3
SSH3-205ENST00000527821 POLNQ7Z5Q5 900 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 KIAA1328Q86T90 577 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 KBTBD6Q86V97 674 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 C11orf74Q86VG3 221 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 UMODL1-AS1Q8N2C9 162 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 FAM160A2Q8N612 972 aaPredicted RBP16.9■□□□□ 0.3
SSH3-205ENST00000527821 FRMD1Q8N878 549 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 SUMF1Q8NBK3 374 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 KCTD6Q8NC69 237 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 HMCESQ96FZ2 354 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 NOL6Q9H6R4 1146 aaKnown RBP16.9■□□□□ 0.3
SSH3-205ENST00000527821 CYP8B1Q9UNU6 501 aa16.9■□□□□ 0.3
SSH3-205ENST00000527821 NYNRINQ9P2P1 1898 aaKnown RBP16.9■□□□□ 0.3
SSH3-205ENST00000527821 A0A0A6YYK5 440 aaPredicted RBP16.89■□□□□ 0.29
SSH3-205ENST00000527821 PRR23AA6NEV1 266 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 RASA4BC9J798 803 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 RASA4O43374 803 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 KDELR3O43731 214 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 DNTTP04053 509 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 AMPD1P23109 780 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 SLC1A1P43005 524 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 SERPINH1P50454 418 aaKnown RBP16.89■□□□□ 0.29
SSH3-205ENST00000527821 CLCN6P51797 869 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 NDST2P52849 883 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 HADHBP55084 474 aaKnown RBP16.89■□□□□ 0.29
SSH3-205ENST00000527821 GEMIN4P57678 1058 aaKnown RBP16.89■□□□□ 0.29
SSH3-205ENST00000527821 RPS14P62263 151 aaKnown RBP16.89■□□□□ 0.29
SSH3-205ENST00000527821 DPYSQ14117 519 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 ELF2Q15723 593 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 Q6ZVU0 165 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 ASCL5Q7RTU5 278 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 METTL3Q86U44 580 aaKnown RBP16.89■□□□□ 0.29
SSH3-205ENST00000527821 STK40Q8N2I9 435 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 CELF6Q96J87 481 aaKnown RBP16.89■□□□□ 0.29
SSH3-205ENST00000527821 CSPG4P5Q96PW8 444 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 CALN1Q9BXU9 219 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 RSPH9Q9H1X1 276 aaPredicted RBP16.89■□□□□ 0.29
SSH3-205ENST00000527821 CD93Q9NPY3 652 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 KLHL11Q9NVR0 708 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 REXO2Q9Y3B8 237 aaKnown RBP16.89■□□□□ 0.29
SSH3-205ENST00000527821 FARP1Q9Y4F1 1045 aaPredicted RBP16.89■□□□□ 0.29
SSH3-205ENST00000527821 HYOU1Q9Y4L1 999 aa16.89■□□□□ 0.29
SSH3-205ENST00000527821 MYO15AQ9UKN7 3530 aa16.88■□□□□ 0.29
SSH3-205ENST00000527821 IGHV1OR15-9A0A0B4J2B8 117 aa16.88■□□□□ 0.29
SSH3-205ENST00000527821 RCCD1A6NED2 376 aa16.88■□□□□ 0.29
SSH3-205ENST00000527821 SMAD6O43541 496 aaKnown RBP16.88■□□□□ 0.29
SSH3-205ENST00000527821 BUB1O43683 1085 aa16.88■□□□□ 0.29
SSH3-205ENST00000527821 SPOPO43791 374 aa16.88■□□□□ 0.29
SSH3-205ENST00000527821 BUB1BO60566 1050 aaPredicted RBP16.88■□□□□ 0.29
SSH3-205ENST00000527821 RHOBTB1O94844 696 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms