RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 ST8SIA6P61647 398 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 RPS14P62263 151 aaKnown RBP11.49□□□□□ -0.57
CTSB-214ENST00000527243 GNA12Q03113 381 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 ZBTB16Q05516 673 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 ACAP1Q15027 740 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 ELF2Q15723 593 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 CA9Q16790 459 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 EFHC2Q5JST6 749 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 C6orf118Q5T5N4 469 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 SCYL2Q6P3W7 929 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 KIAA1324Q6UXG2 1013 aaKnown RBP11.49□□□□□ -0.57
CTSB-214ENST00000527243 PSTKQ8IV42 348 aaKnown RBP11.49□□□□□ -0.57
CTSB-214ENST00000527243 PGBD3Q8N328 593 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 SH2D3CQ8N5H7 860 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 OR7D4Q8NG98 312 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 SPACA7Q96KW9 195 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 SNRNP25Q9BV90 132 aaKnown RBP11.49□□□□□ -0.57
CTSB-214ENST00000527243 PACSIN1Q9BY11 444 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 GPATCH2LQ9NWQ4 482 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 TRMT1Q9NXH9 659 aaKnown RBP11.49□□□□□ -0.57
CTSB-214ENST00000527243 WSB2Q9NYS7 404 aaPredicted RBP11.49□□□□□ -0.57
CTSB-214ENST00000527243 VPS28Q9UK41 221 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 GMEB2Q9UKD1 530 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 CYP8B1Q9UNU6 501 aa11.49□□□□□ -0.57
CTSB-214ENST00000527243 SPTBN4Q9H254 2564 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 EIF3CLB5ME19 914 aaKnown RBP11.48□□□□□ -0.57
CTSB-214ENST00000527243 ZBTB24O43167 697 aaPredicted RBP11.48□□□□□ -0.57
CTSB-214ENST00000527243 CCDC175P0C221 793 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 SRCP12931 536 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 VAV1P15498 845 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 TCF4P15884 667 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 FECHP22830 423 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 GLDCP23378 1020 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 PTGER3P43115 390 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 TPMTP51580 245 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 PEAR1Q5VY43 1037 aaPredicted RBP11.48□□□□□ -0.57
CTSB-214ENST00000527243 ZNF776Q68DI1 518 aaPredicted RBP11.48□□□□□ -0.57
CTSB-214ENST00000527243 SLC36A4Q6YBV0 504 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 LPCAT2Q7L5N7 544 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 RTL3Q8N8U3 475 aaKnown RBP11.48□□□□□ -0.57
CTSB-214ENST00000527243 ZNF592Q92610 1267 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 PRCCQ92733 491 aaPredicted RBP11.48□□□□□ -0.57
CTSB-214ENST00000527243 ARHGEF2Q92974 986 aaKnown RBP11.48□□□□□ -0.57
CTSB-214ENST00000527243 FAM131CQ96AQ9 280 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 KCTD15Q96SI1 283 aaPredicted RBP11.48□□□□□ -0.57
CTSB-214ENST00000527243 EIF3CQ99613 913 aaKnown RBP11.48□□□□□ -0.57
CTSB-214ENST00000527243 NCAPGQ9BPX3 1015 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 C2orf49Q9BVC5 232 aaPredicted RBP11.48□□□□□ -0.57
CTSB-214ENST00000527243 NUP85Q9BW27 656 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 KLC2Q9H0B6 622 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 MUC3BQ9H195 1237 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 NHEJ1Q9H9Q4 299 aaPredicted RBP11.48□□□□□ -0.57
CTSB-214ENST00000527243 ZNHIT6Q9NWK9 470 aaKnown RBP11.48□□□□□ -0.57
CTSB-214ENST00000527243 USP18Q9UMW8 372 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 AP4E1Q9UPM8 1137 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 CHD5Q8TDI0 1954 aa11.48□□□□□ -0.57
CTSB-214ENST00000527243 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 K7ERQ8 282 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 RIOK3O14730 519 aaKnown RBP11.47□□□□□ -0.57
CTSB-214ENST00000527243 SMAD6O43541 496 aaKnown RBP11.47□□□□□ -0.57
CTSB-214ENST00000527243 ZNF821O75541 412 aaPredicted RBP11.47□□□□□ -0.57
CTSB-214ENST00000527243 RNF8O76064 485 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 H2AFZP0C0S5 128 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 TMEM253P0C7T8 217 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 ZNF806P0C7X5 589 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 DESP17661 470 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 EPHB2P29323 1055 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 CD6P30203 668 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 ACVRL1P37023 503 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 CLCN6P51797 869 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 ETF1P62495 437 aaKnown RBP11.47□□□□□ -0.57
CTSB-214ENST00000527243 KRT83P78385 493 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 ARF5P84085 180 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 SLC25A11Q02978 314 aaKnown RBP11.47□□□□□ -0.57
CTSB-214ENST00000527243 PIGHQ14442 188 aaPredicted RBP11.47□□□□□ -0.57
CTSB-214ENST00000527243 ELAVL3Q14576 367 aaKnown RBP11.47□□□□□ -0.57
CTSB-214ENST00000527243 DLG2Q15700 870 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 CSRP2Q16527 193 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 ERMARDQ5T6L9 678 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 DAB2IPQ5VWQ8 1189 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 TXNRD3NBQ6F5E7 133 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 RWDD4Q6NW29 188 aaKnown RBP11.47□□□□□ -0.57
CTSB-214ENST00000527243 H2AFVQ71UI9 128 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 TMEM139Q8IV31 216 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 SLC41A1Q8IVJ1 513 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 TMEFF1Q8IYR6 380 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 UMODL1-AS1Q8N2C9 162 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 STK40Q8N2I9 435 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 GPR161Q8N6U8 529 aaKnown RBP11.47□□□□□ -0.57
CTSB-214ENST00000527243 VOPP1Q96AW1 172 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 TOE1Q96GM8 510 aaKnown RBP11.47□□□□□ -0.57
CTSB-214ENST00000527243 ZNF419Q96HQ0 510 aaPredicted RBP11.47□□□□□ -0.57
CTSB-214ENST00000527243 BTBD6Q96KE9 485 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 EPAS1Q99814 870 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 MAGEH1Q9H213 219 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 ARRDC1-AS1Q9H2J1 176 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 SEMA4GQ9NTN9 838 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 UVRAGQ9P2Y5 699 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 PCSK1NQ9UHG2 260 aa11.47□□□□□ -0.57
CTSB-214ENST00000527243 IP6K2Q9UHH9 426 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms